FMO13031.5prime Sequence
317 bp (317 high quality bases) assembled on 2013-01-30
> FMO13031.5prime
CAATCCACATGGTTTGCGAGAAGTGCGAGGCCAAGCTCTCCAAAGTTTCA
GCGCCCAATCCCTGGCGAACGAGCACAGCTCCTGCGGGAGGACGTAAAAT
CAACGAGAACAAGGCTTTATCCTCGGCCCGCGAGCGATACAATCCCATAG
GGACTGCTTTACCACCTTGCCGAATCTGCCGACAGAAAGTGCACCAGATG
GGTTCGCACTATTGCCAGGCGTGCGCCTACAAAAAGGCCATATGCGCCAT
GTGCGGCAAGAAGATCATGAACACAAAAAACTACAAGCAAAGCTCAACGG
CAAGCTTTCTAGACCAT
FMO13031.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4537-RB | 393 | CG4537-RB | 26..316 | 9..299 | 1410 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9890910..9891073 | 9..172 | 820 | 100 | Plus |
| 2L | 23513712 | 2L | 9891132..9891259 | 172..299 | 595 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:19 has no hits.
FMO13031.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:36 Download gff for
FMO13031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4537-RB | 21..322 | 1..305 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:51 Download gff for
FMO13031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4537-RB | 21..322 | 1..305 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:51 Download gff for
FMO13031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4537-RB | 21..322 | 1..305 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:51 Download gff for
FMO13031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9890905..9891073 | 1..172 | 97 | -> | Plus |
| 2L | 9891133..9891265 | 173..305 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:51 Download gff for
FMO13031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9890905..9891073 | 1..172 | 97 | -> | Plus |
| arm_2L | 9891133..9891265 | 173..305 | 95 | | Plus |
