Clone FMO13037 Report

Search the DGRC for FMO13037

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:130
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15200-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13037.5prime Sequence

365 bp (365 high quality bases) assembled on 2013-01-30

> FMO13037.5prime
CAGTCGACATGTCGAACGGTTTTTCCTTCTGGAACGGACAGCCAGTGAAT
GCGCCTATCTTTCCCCAAATGGGTGATGCCATAAACGTTGGTAGCCAGTG
GTCGTCCAGCGTGGCACCAGGATCCTGTGGACCAAGAACTCGACCGATGC
TGCAGAGCATGGGCGATTTCCAGCCGATGAGATGTCCTCCAGTGCCACCC
AACTTCTTTGGCCAGCCGCACGCCATGGGAACTGGATTTGGAGATGATCA
GGGACCCTGCGAACCCTGCATCGATAATGGAGAAGCCTTCTGCGCCTACA
ACGGCTTGGATATGAGCTGTGCCGGGAGAATTAAGGGCGATTTCTGGGCA
AGCTTTCTAGACCAT

FMO13037.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15200-RA 546 CG15200-RA 125..464 8..347 1700 100 Plus
CG1394-RB 868 CG1394-RB 572..628 261..317 210 91.2 Plus
CG1394-RA 842 CG1394-RA 572..628 261..317 210 91.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11183055..11183394 8..347 1700 100 Plus
X 23542271 X 11170051..11170107 317..261 210 91.2 Minus
Blast to na_te.dros performed on 2014-11-28 18:36:56 has no hits.

FMO13037.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:40 Download gff for FMO13037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15200-RA 121..464 1..347 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:17 Download gff for FMO13037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15200-RA 121..464 1..347 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:08 Download gff for FMO13037.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15200-RA 121..464 1..347 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:08 Download gff for FMO13037.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11183051..11183394 1..347 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:17 Download gff for FMO13037.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11077084..11077427 1..347 99   Plus