FMO13038.5prime Sequence
488 bp (488 high quality bases) assembled on 2013-01-30
> FMO13038.5prime
CAGTCGACATGTCGTCCTACATTTCGCGTCTACTTAAGGCTCAGTCCGCC
TCCAAACGTCTGATCTCCAATTTAACCCAGCGCGACGGAAAGCTAAGCTC
TTTGCTTCGACGACTAGGTTTACAGTGGCAAGGATCAGCCGCTGCTCCTC
AACAGCGTCCCATATCCACAACTCAGGTGCAAAAGTCAGCGCTAATTGCG
GACGATCAACTGGTCACCGGGATTCAGAAGCGCGAAATGCTGCTGGCCAA
GCAGGGCTGCGAGGACCCTTGGGGTTTCAGCAAGGTGATCAGGCGCGGAT
CGGGAAGGGAGAACGACCCCACCGTCGTGCCATCGGCGTTCGATGCACGC
CTCGTAGGCTGTCTGTGCCTGGATGACCGCTTGCCCAAGTGGATGTGGAT
TGAGAAGGACGAGGGACCGAAGCGGTGCGAGTGCGGTTTTTACTTCATCC
TCAAGAATGTCCCACCCGTTGCAAGCTTTCTAGACCAT
FMO13038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11043-RA | 647 | CG11043-RA | 101..562 | 9..470 | 2250 | 99.1 | Plus |
CG9596-RC | 2175 | CG9596-RC | 1553..1835 | 470..188 | 1355 | 98.6 | Minus |
CG9596-RC | 2175 | CG9596-RC | 1890..2070 | 189..9 | 905 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6559766..6560048 | 188..470 | 1355 | 98.6 | Plus |
2L | 23513712 | 2L | 6559531..6559711 | 9..189 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:03 has no hits.
FMO13038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:41 Download gff for
FMO13038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11043-RA | 101..562 | 9..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:22 Download gff for
FMO13038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11043-RA | 101..562 | 9..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:12 Download gff for
FMO13038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11043-RA | 101..562 | 9..470 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:12 Download gff for
FMO13038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6559768..6560048 | 190..470 | 98 | | Plus |
2L | 6559531..6559711 | 9..189 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:22 Download gff for
FMO13038.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6559531..6559711 | 9..189 | 100 | -> | Plus |
arm_2L | 6559768..6560048 | 190..470 | 98 | | Plus |