FMO13041.5prime Sequence
942 bp (942 high quality bases) assembled on 2013-01-30
> FMO13041.5prime
CAGTCGACATGTCGGAGGTCCGCATTCGCCCGCGCCAGGTCCTCATCCTG
ATCATTGTCTTCCTCGTGGTGCTGATGATGGTGCACCGAAACGGGAAGCG
CACATGCCAGGGTCCAGAATACCTCCAGGCCATGTTCGTCCAAGGCGACA
CGTTACCCACGATTTACGCCGTAACGCCAACGTATCCACGGCCCGCCCAG
AAAGCCGAGCTAACCAGACTATCTCACCTCTTTATGCTGCTGCCGCACCT
GCACTGGATCATTGTGGAGGACACGAACGCCACCACTCCGCTGGTCAGAA
ACCTTTTGGATAGAGCCGGATTGGAGAAGCGTTCCACGTTGCTGAACATC
AAGACGCCATCTGAGTTCAAGCTGAAGGGCAAGGACCCCAACTGGATTAA
GCCACGCGGCGTGGAGCAAAGAAATCTGGCTTTGGCCTGGTTGAGGAACC
ATGTCGACGTCGATCGGCACTCTATAGTGTTCTTCATGGACGACGACAAC
TCCTACTCCACGGAACTGTTCGCCGAGATGAGCAAAATCGAAAGGGGTCG
CGTGGGCGTCTGGCCGGTGGGTTTGGTCGGCGGTCTGATGGTGGAGCGAC
CCCTGCTTACGGAGGATGGCACTAAGGTGACCGGATTCAATGCCGCTTGG
CGACCGGAAAGACCATTCCCCATCGACATGGCCGCCTTCGCCATCAGCAT
GGATCTCTTCATCAGGAATCCGCAGGCCACGTTCTCGTACGAGGTGCAAA
GAGGCTATCAGAGAGCGAGATCCTGAGGCATCTGACCCACCAGGGATCAG
CTGCAGCCACTGGCCAATAGGTGCACGGATGTGCTCGTCTGGCACACGCG
CACTGAGAAGACCAAGCTAGCCGCCGAGGAGCGCTCCTGAAGAAGGCCAG
CGATCCGATGGCGGCATGGAGGTCGCAAGCTTTCTAGACCAT
FMO13041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-I-RA | 1560 | CG32775-RA | 76..993 | 9..924 | 4495 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4131555..4132266 | 215..924 | 3365 | 99.4 | Plus |
| X | 23542271 | X | 4131286..4131494 | 9..217 | 1045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:15 has no hits.
FMO13041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:42 Download gff for
FMO13041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 66..990 | 1..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:30 Download gff for
FMO13041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 72..996 | 1..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:17 Download gff for
FMO13041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 72..996 | 1..928 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:17 Download gff for
FMO13041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4131282..4131494 | 1..217 | 98 | -> | Plus |
| X | 4131558..4132263 | 218..921 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:30 Download gff for
FMO13041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4025315..4025527 | 1..217 | 98 | -> | Plus |
| arm_X | 4025591..4026296 | 218..921 | 99 | -> | Plus |
