FMO13045.5prime Sequence
1124 bp (994 high quality bases) assembled on 2013-01-30
> FMO13045.5prime
CAGTCGACATGAGCACGCGAAGACAGACCAGTCCTCTGAGGAATCTTCGC
CAGAAATGCGGCGGCAGTTGCACTAGTGACGATGACCTGCCTGAGGTCAA
GTTAATCACCCAGCCCATCAATGGTCTGCATTACATCCGGAATCGACTGA
GACCACCGAAATCCCGAAACGGCATTTACTACAGCACAGATTGGGACAAG
TCTGCGCTGGTCAGCAATTTCCAGAAAAGAGGTTGGCTACAGGTGCCCTC
CTTTAATGGCGAATGGAACTTCTATTGGGCGTGCACCCAGAATTGTCGCT
ACATCTTCGGCATCGATCATCCATATCGCATGCGATCAGATCAAGTCATT
AACCACTTCCCGAACTCCATTGAGCTGTCGCGCAAGGATTTGCTAATCAA
GAACATCAAGCGCTATCGCAAAGATCTGGAGCGACGTGGCGATCCGTTGG
CTCAAAGCCATCCACCGGATACGAAACTGGGCATAGGCGGTACCCGTTAC
AAGCACCTGGACATCATACCCATGACCTTTGTCCTCCCCTCCGATTACCA
AATGTTCGTCGAGGTCTTCCATCGCAATCCGGCCAGCACGTGGATAGTGA
AGCCATGCAGCAAGTCCCAGGGTGTAGGTATCTATCTGGTCAACAAGTTG
TCCAAACTGAAAAAATTCGCATACGATGCGCGCACCTTCTATCCGCAAAT
CAACCGGGACACCTGCGTCATTTCCAAGTACATCGACAATCCACTGCTGA
TCGGCGGCAAGAAATTCGACCTGCGACTCTTCGTCCTTGTGACCACATTC
AATCCGCTCAAGGCTTATCTCTATAAAGAGGGTTTCTGCCGTTTTGCACC
GAGAAGTACGACGAAACTGAGATTGATAACGTGTTTATGCACTTGACGAA
CGTCAGCATCCAGAAAACGAATCAAGAGTACATTCCATCCATGGTGCAAT
GGCCCCTCCAGATCTGTGCTGTACTTGACAGCCTGCGAGGCGAGGGCGTT
TCGATATGCTGTGAGCCGCATCACCGCCCACCATCAGGCACTCCTTGGAC
GCACTGGCTCGGTGGATGGCACGATCGTCATTGTTCAGGTCATGGCTTGA
ACATATCATTGTATATACCTGAGC
FMO13045.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8918-RA | 1630 | CG8918-RA | 81..1197 | 9..1111 | 5065 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17201553..17202132 | 922..344 | 2835 | 99.7 | Minus |
| X | 23542271 | X | 17202184..17202518 | 343..9 | 1675 | 100 | Minus |
| X | 23542271 | X | 17201246..17201407 | 1085..932 | 295 | 90.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:41 has no hits.
FMO13045.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:45 Download gff for
FMO13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8918-RA | 74..1190 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:47 Download gff for
FMO13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8918-RA | 74..1190 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:30 Download gff for
FMO13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8918-RA | 74..1190 | 1..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:30 Download gff for
FMO13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17201553..17202132 | 344..922 | 99 | <- | Minus |
| X | 17202184..17202525 | 1..343 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:47 Download gff for
FMO13045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17095586..17096165 | 344..922 | 99 | <- | Minus |
| arm_X | 17096217..17096558 | 1..343 | 98 | | Minus |
