FMO13050.5prime Sequence
512 bp (512 high quality bases) assembled on 2013-01-30
> FMO13050.5prime
CAGTCGACATGGAGTTCATTAGCCATTTCTTGCGAGCGACGAGCAGACGC
ACCGCCGCATTGGGTCCAATCCTGCAAAGAAATCGTAGCGAAATCATCCA
AAAACAATCTTTGACCAATCGACAGGCATTCCGCAGATACAGATCCAGCT
GCAGCACCATGGACACCACCGTTCACTCCGCCGGCATCGATGAGACCCAC
CTGGTGCCCATGAGCGTCATCCAGCGACCCATTCCCTCCGTCCTGGACGA
GCAGAAGGTGCAATCCCTGATGGAAACCATTAAGAACGAAACCAGCGAAG
ATGAGGTGCCCCCCATCGACCTGCTGTGGATCTCGGGCAGCGAGGGAGGC
GACTACTACTTCAGCTTCGGCGGATGCCACCGGTTCGAGGCGTACAAGCG
GCTACAGCGGCCGACGATCAAGGCGAAGCTGGTGAAGTCCACACTGGGCG
ATCTGTATCACTACATGGGCTCCAGCGCGCCCAAGTACCTGGCCGCAAGC
TTTCTAGACCAT
FMO13050.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-RA | 984 | CG6762-RA | 149..635 | 8..494 | 2435 | 100 | Plus |
| CG6762-RC | 788 | CG6762-RC | 149..616 | 8..494 | 2140 | 96.1 | Plus |
| CG6762-RB | 921 | CG6762-RB | 362..749 | 107..494 | 1940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17858050..17858261 | 283..494 | 1060 | 100 | Plus |
| X | 23542271 | X | 17857473..17857650 | 107..284 | 890 | 100 | Plus |
| X | 23542271 | X | 17857260..17857358 | 8..106 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:06 has no hits.
FMO13050.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:48 Download gff for
FMO13050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 83..585 | 1..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:03 Download gff for
FMO13050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 141..643 | 1..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:45 Download gff for
FMO13050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 141..643 | 1..503 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:45 Download gff for
FMO13050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17857252..17857358 | 1..106 | 96 | -> | Plus |
| X | 17857473..17857650 | 107..284 | 100 | -> | Plus |
| X | 17858052..17858269 | 285..503 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:03 Download gff for
FMO13050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17751285..17751391 | 1..106 | 96 | -> | Plus |
| arm_X | 17751506..17751683 | 107..284 | 100 | -> | Plus |
| arm_X | 17752085..17752302 | 285..503 | 98 | | Plus |
