FMO13051.5prime Sequence
680 bp (680 high quality bases) assembled on 2013-01-30
> FMO13051.5prime
CAGTCGACATGTGTTTTTGCTGTGCTCGATTAATTAGTGGATCGTCACGG
AACTGGAGTTATAAAGTAAGCCGACGGTGCCAGACGAAGCTCAGACTGAC
TAAAAAAATGGCCCGGCATATAGCCCTGCTGATCTGCTCATTGCTAGCGA
TGGCTGGCTGTGATCCAATCGATGTGGACTGTACTCGCAGACAGGATTTC
AATATTGTCAAGGACTGCTGTGTCTATCCCACATTTAGGTTTGACCAGTT
CAAAAGCCAGTGTGGTAAATATATGCCAGTTGGTGCTCCCAGAATTTCAC
CCTGCCTCTATGAATGCATTTTCAATAAGACCAACACAGTTGTGGACGGA
GCTATTCATCCTGACAATGCCCGACTCATGCTGGAGAAGCTTTTCGGTAA
TCAGGACTTTGAAGAAGCCTATTTCAATGGTTTAATGGGCTGTTCGGATT
CTGTGCAAGAGATGATTAGCAACAGGAGGTCACGGCCCCAAAGAAAAACA
GAACAATGCTCTCCATTCTCACTTTTCTATGGAATTTGTGCCCAGAGATA
TGTCTTCAACCATTGTCCATCATCCAGCTGGTCCGGCACTGAATCTTGCG
AAATGGCCCGATTGCAGAACATGAACTGTTCGAAACCATCACGTGGTTCT
AGTCATCGCCTTGCAAGCTTTCTAGACCAT
FMO13051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50b-RB | 1648 | CG30073-RB | 960..1613 | 9..662 | 3270 | 100 | Plus |
| Obp50c-RC | 1648 | CG30072-RC | 960..1613 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14372612..14372971 | 303..662 | 1800 | 100 | Plus |
| 2R | 25286936 | 2R | 14372199..14372393 | 9..203 | 975 | 100 | Plus |
| 2R | 25286936 | 2R | 14372457..14372555 | 204..302 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:13 has no hits.
FMO13051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:48 Download gff for
FMO13051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50b-RB | 960..1618 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:06 Download gff for
FMO13051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RB | 960..1618 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:50 Download gff for
FMO13051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RC | 960..1618 | 9..667 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:50 Download gff for
FMO13051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14372199..14372393 | 9..203 | 100 | -> | Plus |
| 2R | 14372457..14372555 | 204..302 | 100 | -> | Plus |
| 2R | 14372612..14372976 | 303..667 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:06 Download gff for
FMO13051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10259704..10259898 | 9..203 | 100 | -> | Plus |
| arm_2R | 10259962..10260060 | 204..302 | 100 | -> | Plus |
| arm_2R | 10260117..10260481 | 303..667 | 99 | | Plus |
