FMO13052.5prime Sequence
308 bp (308 high quality bases) assembled on 2013-01-30
> FMO13052.5prime
CAGTCGACATGCGGCATCTGTTGCTTCTGGCCTTAGTTTACATGGCTCTG
GTTTTGGCCAAACCGGCGACGGAGGCGCCTCGTCTGCTCATCGATTCAGC
GCCCTCAGTGGTCTCCTACCAGGGTTCCTCACAGGCCCAAACCCGCTTCG
TCATCGCGCCCATGGGCCGATCATTGGGCTACGTGGAGCCCACCAATCTC
AATCGAACCTTTCACACGAAGGCAACGCAGGAGGGAGGCGCCACCGGCTA
CGAGCAGCTCAATCTGAGTCCGGTCTACGTGCCGGGTAGCGCAAGCTTTC
TAGACCAT
FMO13052.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13038-RA | 509 | CG13038-RA | 165..447 | 8..290 | 1415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16327320..16327590 | 290..20 | 1355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:38:19 has no hits.
FMO13052.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:49 Download gff for
FMO13052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13038-RA | 142..429 | 8..296 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:11 Download gff for
FMO13052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13038-RA | 165..452 | 8..296 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:53 Download gff for
FMO13052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13038-RA | 165..452 | 8..296 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:53 Download gff for
FMO13052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16327315..16327589 | 21..296 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:11 Download gff for
FMO13052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16320415..16320689 | 21..296 | 98 | <- | Minus |
