FMO13064.5prime Sequence
1069 bp (1010 high quality bases) assembled on 2013-01-30
> FMO13064.5prime
CAGTCGACATGATTCGAAAGGTGCCGCTAATTGTAGTCCTGGGCTCCACG
GGCACCGGAAAGACGAAACTGTCTTTGCAACTGGCCGAACGCTTCGGAGG
AGAAATAATCAGCGCTGACTCCATGCAGGTTTACACCCACCTGGACATCG
CCACCGCCAAGGCAACCAAGGAGGAGCAGTCCCGGGCACGACATCATCTA
CTGGACGTGGCCACACCGGCCGAACCCTTCACAGTCACTCACTTTCGTAA
CGCAGCACTGCCCATTGTGGAGCGCCTGCTCGCCAAGGACACTTCTCCGA
TTGTGGTGGGCGGCACGAATTACTACATAGAATCCCTACTTTGGGATATT
CTGGTTGACTCGGATGTCAAGCCGGACGAAGGCAAACATTCGGGGGAGCA
TCTTAAGGATGCCGAACTGAATGCTTTGTCCACCCTCGAGCTGCATCAGC
ACCTTGCCAAGATCGACGCAGGTAGTGCCAACCGTATTCACCCCAACAAC
CGGCGCAAGATCATCCGGGCTATCGAAGTGTATCAGAGCACCGGGCAGAC
TTTGAGCCAGATGCTGGCGGAACAGCGGGCACAGCCGGGAGGAAACCGCC
TGGGTGGACCCCTTCGCTATCCACACATCGTTCTCCTTTGGTTGCGTTGC
CAGCAGGATGTTCTAAACGAGCGATTGGATTCCCGCGTAGATGGCATGCT
GGCCCAAGGGCTGCTCCCTGAACTACGACAGTTTCACAATGCCCACCATG
CTACCACTGTGCAAGCCTATACGTCGGGAGTTCTGCAGACGATTGGCTAC
AAGGAGTTTATTCCCTATCTGATCAAGTACGACCAGCAGCAGACGAAAAG
ATAGAGGAGTACCTCAAACCCATAGTTACAGCTGCCAGGCCCAGAAAACT
GAAAGAGACGTCTTCCAGATGGCTTGACCTCCTACGCAATTGTGCGAAGA
ACTAAAGTTAGTCACTCGCCGATACTCAAAGAAGCAGCTGAAGTGATCAA
CAATCGATTCCTGTCAGCCAAGATCGTCAGTGCCCGATCTCTCCCAACTG
TAACACCATGATGTGCCGC
FMO13064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31381-RB | 1680 | CG31381-RB | 198..1272 | 2..1065 | 4905 | 97.9 | Plus |
| CG31381-RA | 1699 | CG31381-RA | 217..1291 | 2..1065 | 4905 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24877345..24878404 | 2..1050 | 4635 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:22:41 has no hits.
FMO13064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:57 Download gff for
FMO13064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RB | 174..1234 | 1..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:14 Download gff for
FMO13064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RB | 197..1257 | 1..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:04 Download gff for
FMO13064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31381-RA | 216..1276 | 1..1050 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:04 Download gff for
FMO13064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24877344..24878404 | 1..1050 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:14 Download gff for
FMO13064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20703066..20704126 | 1..1050 | 98 | | Plus |
