FMO13065.5prime Sequence
746 bp (746 high quality bases) assembled on 2013-01-30
> FMO13065.5prime
CAGTCGACATGGCCGAATTCTCAGTGGAACGCGTCGAGGACAAGCGAACG
GTGAACGGACGAACGGAATACTATCTAAAGTGGAAGGGCTATCCGCGCAG
CGAAAACACCTGGGAGCCGGTGGAGAATCTCGACTGTCCAGACCTGATAG
CCAACTTCGAGGAGTCGCTGAAGAACAACAAGAAGGAGACAAAGAAACGC
CTGTCCACCTCCTCCACACCCGAATCCATACGCAGCAAACGCAAGAGCTT
CCTGGAGGACGATACCGAGGAGCAGAAGAAGCTGATCGGCTTCGAGCGCG
GTCTGGAGGCATCAAAAATACTGGGCGCCACCGACTCATCCGGGCACCTA
ATGTTCCTCATGAAGTGGAAGGGCAGCGATCACGCCGACCTTGTGCCCGC
CAAGCTGGCCAACACTCGATGCCCCCAGGTGGTCATACAGTTCTATGAGG
AGCGCCTCACCTGGCACACGGGCAGCGGCAATGGTAATGGGAATACGAAT
TCCGTCAATTTGGGATCATCCGGTGGCCTGGGCTCCGTCGGCGGCAGTGG
GGCTGGCGATGATACTGCTCCCGGCAGCGTTGGCACCACCGGTGGCGGCA
GCAATATAGATGGCGGTGACGAGGAGGATCCCGAACCGGCTAGCCCCATT
GGCAGCATCAATCAAGACGAGAATATCAAGCCGGACGAGAGTAGTGAGCT
GGACAACGGACAGCCGGATGCGGATGACGCAAGCTTTCTAGACCAT
FMO13065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HP1b-RB | 1105 | CG7041-RB | 106..825 | 9..728 | 3540 | 99.4 | Plus |
| HP1b-RC | 1493 | CG7041-RC | 106..825 | 9..728 | 3540 | 99.4 | Plus |
| HP1b-RA | 1210 | CG7041-RA | 211..930 | 9..728 | 3540 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9081359..9082078 | 9..728 | 3540 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:22:47 has no hits.
FMO13065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:58 Download gff for
FMO13065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1b-RA | 204..935 | 1..736 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:19 Download gff for
FMO13065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1b-RA | 204..935 | 1..736 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:07 Download gff for
FMO13065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP1b-RA | 204..935 | 1..736 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:07 Download gff for
FMO13065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9081352..9082083 | 1..736 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:19 Download gff for
FMO13065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8975385..8976116 | 1..736 | 98 | | Plus |
