FMO13067.5prime Sequence
1098 bp (980 high quality bases) assembled on 2013-01-30
> FMO13067.5prime
CAGTCGACATGGGTCGGAAGGCTGAATACAGTGAGAAACCGAAAAAGGGA
CCTGGGCGCAAGGCGCGCAAGCAAGGACCGCCTGTTTTTCGCAAACAATC
GTTTGCTCCCATGGAAGAGGAGGACAAGAAGCTTTCCCACCGACAGAAGC
AGAGGTTCGTTAAGCGAGAGCAAAAGAAAGTAGTCCAGAAGGCCAAACTA
CAGGAGAAGAGGGCCAAGGGAAAGTTACCACAACCGGCTAAGCGGAAGAC
GGCCTACAACAGCGACAGCGATCCTGAGGATAATGAAGAGGAACCACAGG
TTGCATCCTCCGATGAGGAGGTGCCTCAACTGGTGCCGGCTCCGAAGGGC
CAGAAAGCTACAGCTCCCAAGGGTTTTACAGATGATAATGATGCCTGGCT
GAAGCCCAAGAAGCAACAGAAGCAGCCAGAAACGGAGTCCGAGGAGGAGG
AGGAGGAGGATGAGGAGTCGGAGGAGGACTCCGAAGATGAGTTGGGAGAA
GAATGTGAAGAGGAAGAGGAGGGAGACGATGAGGAAGGATTGGAATCTGA
TGATGATACCGCTCAGGTTGGCAAGCTGGCCGATCTATCCGACGATGATG
ATGCCAACTCCGACGATGACTTTGACATATCTGGCGAGGAAGATGGTGCT
CAGGCAGACAGTGATGAAGAGGAGGATGAGGACGACGACGATGATGATGA
TGATGATGATGATGACAAGCTGCCCATCGAGCGGGCTAACAAGAAGTTGA
AAAAAGCGCGAGGCAGAGGAAGCCCAACTGGCCGACGACGAAATGTTGGA
AACCGTTTGACAAGCAGGATGTTTTCCAGCTACCCGTCAAAGGCGAAAAA
CCGAGAAAGGACCTAACCCTGCAGGAAGTGCACAGCGCATAAAGGACGTC
AGTCTGGTTCTTTCCGACTTCAAAAGTATCGTCAAGCGGATAGGTCCTGC
GGGGAGTACTTCGATTTGCTGCGCAGGAATCTGTGTTTGATTACGCTACA
CGAAATTTTTGGATGGAAAACTGATGGATATGTTGCCCATGAATGAGCTA
TGGAATATCTGAGGGCTTCTGAAAATCTGTCTGTTCCCCTTACATCAT
FMO13067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8545-RA | 2949 | CG8545-RA | 103..1158 | 9..1061 | 4830 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12468911..12469870 | 105..1061 | 4100 | 96.8 | Plus |
| 2R | 25286936 | 2R | 12468753..12468849 | 9..105 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:30:59 has no hits.
FMO13067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:17:58 Download gff for
FMO13067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8545-RA | 114..1180 | 9..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:41 Download gff for
FMO13067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8545-RA | 103..1169 | 9..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:48 Download gff for
FMO13067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8545-RA | 103..1169 | 9..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:48 Download gff for
FMO13067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12468753..12468849 | 9..105 | 100 | -> | Plus |
| 2R | 12468912..12469845 | 106..1037 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:41 Download gff for
FMO13067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8356258..8356354 | 9..105 | 100 | -> | Plus |
| arm_2R | 8356417..8357350 | 106..1037 | 98 | -> | Plus |
