FMO13072.5prime Sequence
530 bp (530 high quality bases) assembled on 2013-01-30
> FMO13072.5prime
CAGTCGACATGAAGTTCTATCCGAATGCAGATGTCTGGTTCTGTGTGGAC
AAGACCAGCTGCTTGAACAGCTATCAAAAGTATCCACCCACGCACAGCTG
GAAGATTCACGATCGGACCACCGCGCGGGAAATGTACTATTGGCGCGACA
TCGAGGGCGTGAAGAAGACGGAGATCAAGCTTAAGGATCTGTACTTCACC
AATTGGCCCAAAACCCGCATCCGTCCACAGGCCTGCTTGGGATTGCTCTA
TGCCACGGGCAACAGATTCATCCGACTGACCAAGGCACCACCAGCGGGCT
TCAAGTGTGCACCACTGCCCGTCAATCTGGCCACCGCTCGAATTGTCAAA
GTGGAGCTGCGCAAGAAGGCGAAGCGCGAAAAACAGGCAGCTAAAAAGGC
TAAAAAGGAAGCGAAGAAGGCCAAGAAGGCGGGCAAAAAGGGCAAAGGAA
AGGGCGGTAATGGCGATCTTAAGCCAAAGGTCATTAGGACATACGAAGAC
GCCGAGAAAGCAGCAAGCTTTCTAGACCAT
FMO13072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16739-RA | 695 | CG16739-RA | 114..618 | 8..512 | 2525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20342106..20342449 | 8..351 | 1720 | 100 | Plus |
| 2R | 25286936 | 2R | 20342510..20342672 | 350..512 | 815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:09 has no hits.
FMO13072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:54 Download gff for
FMO13072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16739-RA | 72..591 | 1..520 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:44 Download gff for
FMO13072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16739-RA | 107..626 | 1..520 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:20 Download gff for
FMO13072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16739-RA | 107..626 | 1..520 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:20 Download gff for
FMO13072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20342512..20342680 | 352..520 | 97 | | Plus |
| 2R | 20342099..20342449 | 1..351 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:44 Download gff for
FMO13072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16230017..16230185 | 352..520 | 97 | | Plus |
| arm_2R | 16229604..16229954 | 1..351 | 99 | -> | Plus |
