FMO13074.5prime Sequence
728 bp (728 high quality bases) assembled on 2013-01-30
> FMO13074.5prime
CAGTCGACATGGCGGCGGAAAAGTGTGCAGAAGAGTTTGGGGACTCCTCC
GCGGCGTCCTTGAAAATTGTACCAAAGGACTATGCATATCCACTTCTAGA
GGATCCGCAAGGCGCGCTGACCACGCCCACTGAAGGCGGGCGGACGCTAG
TTACCCGCGGTGGCTTTAACTACTTCCACTACGGATGCGATGGCCACCAG
GATGCTGGCTGGGGTTGTGGCTACCGCACCCTGCAATCGGCCATTTCCTG
GATCCAACGTCGACAGGGGTCGAGCGGTCATGTTCCTTCCATCCGGGAGA
TTCAGCAGATCCTGGTGGCCATCGGCGACAAGGGTCCAGAGTTCGTGGGC
TCGCGCGACTGGATCGGAACGCTCGAGGAGTTCTACGTGATCGATGTGCT
GCACCAGGTGCCGTGCAAGATTCTTCACGCCAAGGAGCTTAGCTCGGACG
AGATCCTCGGCGAGCTTCGGAGCTATTTTGAGAAGTACCAAGGCTTCGTC
GCCATGGGCGGTCTGAGTGACACCGCCTCCAAGGCTATTACCGGCTACCA
TTGCAGTGCACGCGGTCGCATCTTCCTGCAGGTGGTGGATCCGCATTTCG
TAGGCGTGCCCAGCTCCCGGCAGCACTTAATCGATCTGGGCTACGTTCGT
TGGGTGCCCGTTGACGAGTTCGCCGGCAGCACGTACAACCTCTGCCTCAT
CTTGCAGCCGGCAAGCTTTCTAGACCAT
FMO13074.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30157-RB | 927 | CG30157-RB | 158..859 | 9..710 | 3510 | 100 | Plus |
| CG30157-RA | 1034 | CG30157-RA | 265..966 | 9..710 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6974290..6974869 | 588..9 | 2900 | 100 | Minus |
| 2R | 25286936 | 2R | 6974106..6974229 | 710..587 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:31:36 has no hits.
FMO13074.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:03 Download gff for
FMO13074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 261..966 | 4..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:01 Download gff for
FMO13074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 261..966 | 4..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:08 Download gff for
FMO13074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30157-RA | 261..966 | 4..710 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:08 Download gff for
FMO13074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6974106..6974228 | 588..710 | 100 | <- | Minus |
| 2R | 6974291..6974873 | 4..587 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:01 Download gff for
FMO13074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2861611..2861733 | 588..710 | 100 | <- | Minus |
| arm_2R | 2861796..2862378 | 4..587 | 99 | | Minus |
