FMO13075.5prime Sequence
895 bp (895 high quality bases) assembled on 2013-01-30
> FMO13075.5prime
CAGTCGACATGGATTCGTCTGAAAGCCAATCGCAAATGGATGACCAAGAT
GCTCGCATACTGCGTCTGCAAAATCTGATCGAAAAGAATATTGAGATAGA
GCAACAAATCGAAAACAACACCATCGGAGAGTCTATCACGGCCATAGAGG
AAATCATTCAGACAGCCAACGATATCAGCAAGGGACATGAAGACCGCCGT
ACAAACTCCACGGAACTTGTCCTGGACACGGAGCTACTGCGTCGCAATTT
CGAAGTTGTGGGAAAAGCTATCCAACATAACACCAACGTCACGGATCGAA
TGGTGGCCACGGCGATCAACGATTTGGTTTTCAAAGAGAGCGAAGAAGAT
TGGGATGCTCTTTGTTCATTGGCTATTCAGTTCGGAAGACCACTCTTCAC
CAATGATAGCATGCTGCCCTTCATAGATGTTACTCCAAAGTTGGTGGTTC
AAAAGCAACGTGCTCCTCGCAAAACGAAATCTCAAGTAGATGAGAAGCGT
CCAGAAAAGAGTGACCAATTGGAACGCAAGGACGAAGGAGCAGCGTCCGT
AACCCACATGCTGAAGCAAATAAGACAAATATATCGAGATGGCAATCAAG
AGCCGATTCCGTACTTTAAACTGATTTGCAATCCAAACAATTTTATGGAC
ACCGTTCAGAACGCTTTGCAACTGTCGTTTCTTGTCAAGGAGAACTATAT
TTCCATCGAAAATGGCGAGGATGGTTTGCCATTGGTTCGCGTTGTGAATT
CCAAATCGGTCGAAGGAAACGCACCGTCCCAGGCTATTTGTTCCATCGAT
GTTACCTTTTGTGAGAAATGGTAAAGCACTACAACCTACATGAGCCCAAT
GTTAAAAGACTTCCGGTTAGTGAGAAAGCAAGCTTTCTAGACCAT
FMO13075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nse4-RC | 1029 | CG13142-RC | 90..959 | 9..877 | 4265 | 99.5 | Plus |
Nse4-RB | 1383 | CG13142-RB | 90..959 | 9..877 | 4265 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10440176..10440505 | 486..815 | 1650 | 100 | Plus |
2L | 23513712 | 2L | 10439669..10439888 | 98..317 | 1100 | 100 | Plus |
2L | 23513712 | 2L | 10439945..10440115 | 318..488 | 840 | 99.4 | Plus |
2L | 23513712 | 2L | 10439529..10439619 | 9..99 | 455 | 100 | Plus |
2L | 23513712 | 2L | 10440562..10440623 | 816..877 | 235 | 91.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:31:43 has no hits.
FMO13075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:04 Download gff for
FMO13075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13142-RB | 83..959 | 1..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:05 Download gff for
FMO13075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13142-RB | 83..959 | 1..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:12 Download gff for
FMO13075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nse4-RB | 83..959 | 1..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:12 Download gff for
FMO13075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10439522..10439619 | 1..99 | 95 | -> | Plus |
2L | 10439671..10439888 | 100..317 | 100 | -> | Plus |
2L | 10439945..10440112 | 318..485 | 99 | -> | Plus |
2L | 10440176..10440505 | 486..815 | 100 | -> | Plus |
2L | 10440561..10440623 | 816..877 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:05 Download gff for
FMO13075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10439522..10439619 | 1..99 | 95 | -> | Plus |
arm_2L | 10439671..10439888 | 100..317 | 100 | -> | Plus |
arm_2L | 10439945..10440112 | 318..485 | 99 | -> | Plus |
arm_2L | 10440176..10440505 | 486..815 | 100 | -> | Plus |
arm_2L | 10440561..10440623 | 816..877 | 95 | | Plus |