FMO13084.5prime Sequence
239 bp (239 high quality bases) assembled on 2013-01-30
> FMO13084.5prime
CAGTCGACATGCTCAAGTTTCTGTTAACTTTTGGCGCCGGGGTGTATACG
GGAATCTATGTCTCACAGAACTATGAGGTCCCCCGAGTGGATGATCCCCA
GAAGTTGATGCAGCGTTTCAACGAGAAACTCAAAGAACTAATGGATCAAA
CCAAGAACAAATCGCCCGGCGAGAAACTAGTGGATGACATCAAAAAGGAG
GCCAAGAAGATACTAGACGACGCAAGCTTTCTAGACCAT
FMO13084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33170-RC | 357 | CG33170-RC | 70..282 | 9..221 | 1065 | 100 | Plus |
CG33170-RB | 599 | CG33170-RB | 312..524 | 9..221 | 1065 | 100 | Plus |
CG33170-RA | 842 | CG33170-RA | 211..348 | 23..160 | 690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22865876..22865960 | 76..160 | 425 | 100 | Plus |
3L | 28110227 | 3L | 22867395..22867460 | 156..221 | 315 | 98.5 | Plus |
3L | 28110227 | 3L | 22865770..22865826 | 23..79 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:31:23 has no hits.
FMO13084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:02 Download gff for
FMO13084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33170-RB | 302..529 | 1..228 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:53 Download gff for
FMO13084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33170-RB | 302..529 | 1..228 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:00 Download gff for
FMO13084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33170-RB | 302..529 | 1..228 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:00 Download gff for
FMO13084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22865771..22865824 | 24..77 | 100 | -> | Plus |
3L | 22865878..22865960 | 78..160 | 100 | -> | Plus |
3L | 22867400..22867465 | 161..228 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:53 Download gff for
FMO13084.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22858871..22858924 | 24..77 | 100 | -> | Plus |
arm_3L | 22858978..22859060 | 78..160 | 100 | -> | Plus |
arm_3L | 22860500..22860565 | 161..228 | 94 | | Plus |