Clone FMO13089 Report

Search the DGRC for FMO13089

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:130
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34229-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13089.5prime Sequence

296 bp (296 high quality bases) assembled on 2013-01-30

> FMO13089.5prime
CAGTCGACATGTCCAAGTTACCAAAAGCATCACTTAGTTTGAAGCAGTTT
ATGCTGCGCCAGGAAGTACTGAAGCTCTACCGGGAAATATTTCGAACGAT
TCGTCAGGTTCCCGACAAAAACAGCCAGCTGGAGCTAAAATCCTGGGCAC
GGCATGACTTCCAGACGAATCGCCATCAAAGTGACGAGGTGGCCATCAAG
ATGCTCCTTCAGCACGGCAGACGCAGCCTCACAGAACTAAGGACCAGCCT
CCAACTGAGCGGGGTGAGCGAGGGCAAAGCAAGCTTTCTAGACCAT

FMO13089.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34229-RA 474 CG34229-RA 117..386 9..278 1350 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11841844..11842076 46..278 1165 100 Plus
2R 25286936 2R 11841724..11841762 9..47 195 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:32:42 has no hits.

FMO13089.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:11 Download gff for FMO13089.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34229-RA 109..386 1..278 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:36 Download gff for FMO13089.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34229-RA 109..386 1..278 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:41 Download gff for FMO13089.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34229-RA 109..386 1..278 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:41 Download gff for FMO13089.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11841716..11841762 1..47 91 -> Plus
2R 11841846..11842076 48..278 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:36 Download gff for FMO13089.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7729221..7729267 1..47 91 -> Plus
arm_2R 7729351..7729581 48..278 100   Plus