FMO13090.5prime Sequence
278 bp (278 high quality bases) assembled on 2013-01-30
> FMO13090.5prime
CAGTCGACATGGCTATGGCTAATGTGGACAAAGGTGAACTTATGGACCAG
GTTAAGCAACAGATTGCTGTTGCGAATGCCCAGGAATTGCTCACGCAAAT
GACCGAAAAGTGCTTCAAAAAATGTGTCAATAAGCCGGGAACTTCCCTCG
ATTCGTCCGAACAGAAATGCATTTCCATGTGCATGGACCGGTTTATGGAC
TCGTGGAACCTCATTTCTCGGGTGTACGGCCAAAGAATACAACGTGAACA
ATCCAAGTTCGCAAGCTTTCTAGACCAT
FMO13090.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34132-RA | 535 | CG34132-RA | 147..398 | 9..260 | 1260 | 100 | Plus |
Tim13-RA | 442 | CG11611-RA | 106..289 | 25..208 | 260 | 76.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7885649..7885804 | 9..164 | 780 | 100 | Plus |
2L | 23513712 | 2L | 7885875..7885972 | 163..260 | 490 | 100 | Plus |
3L | 28110227 | 3L | 11774213..11774396 | 208..25 | 260 | 76.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:32:48 has no hits.
FMO13090.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:12 Download gff for
FMO13090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34132-RA | 1..255 | 9..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:41 Download gff for
FMO13090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34132-RA | 140..401 | 1..264 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:46 Download gff for
FMO13090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34132-RA | 140..401 | 1..264 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:46 Download gff for
FMO13090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7885642..7885804 | 1..164 | 97 | -> | Plus |
2L | 7885877..7885975 | 165..264 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:41 Download gff for
FMO13090.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7885642..7885804 | 1..164 | 97 | -> | Plus |
arm_2L | 7885877..7885975 | 165..264 | 98 | | Plus |