FMO13105.5prime Sequence
677 bp (677 high quality bases) assembled on 2013-02-11
> FMO13105.5prime
CAGTCGACATGTGGATCGCGAACGAACGCACTATCTGCGCACTGATGCCA
CTGGTGATTTTGGCGACCTGGCAGCTGTGCCTTCTTCCCGGGACGGATGC
CAAGCACTTGGCCATCAGATTGCGCGACCCTCAAAGCGAAATCGAATCGG
AAACGGTGCCCCTAGCCCATGTCCACAGCCACAGCCACACGGACGAGAGT
GGCGTTCGCGGTGCTGCTGCAGTGCATCGTCGGGAGCGGCGGCAACTCTC
CGATTGGCTAATTGCGCCCAACACGCGGTGGTGCGGACGCGGCAATCTGG
CCAATGGAACGTACAACGATCTGGGCGGCGCTTCCAAGGCGGACAAATGC
TGCCGGAAGCATGATCACTGCAAAATGTGGATCGATGGCATGTCCAATCG
CTATGATCTCTTCAACTATCGACCGTACACGCTGTCACACTGCAGCTGTG
ATCTACGGTTCCGCACGTGTCTGAAGATGGCCGGCGACGAGGATGCGAAC
GCCATCGGAAAGCTCTTCTTCAATGTCGTGCAGACGCAGTGTTTCGGCCT
GAAGGCCGAGACCGTTTGCGTTCAGCGGGGCGGCTCCGGAAAGGAGACCG
ATCCGTGCCTCAAGGAGGAGGTGCGTCACAAGGCCTTCCTGCGCGACAAC
AAGCGGTTCGCAAGCTTTCTAGACCAT
FMO13105.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GIIIspla2-RC | 1543 | CG1583-RC | 97..747 | 9..659 | 3255 | 100 | Plus |
| GIIIspla2-RB | 1212 | CG1583-RB | 97..747 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8157724..8158374 | 9..659 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:57 has no hits.
FMO13105.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:57 Download gff for
FMO13105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 64..725 | 1..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:55 Download gff for
FMO13105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 90..751 | 1..664 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:22 Download gff for
FMO13105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GIIIspla2-RB | 90..751 | 1..664 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:22 Download gff for
FMO13105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8157717..8158378 | 1..664 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:55 Download gff for
FMO13105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8051750..8052411 | 1..664 | 99 | | Plus |
