Clone FMO13108 Report

Search the DGRC for FMO13108

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:131
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14958-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13108.5prime Sequence

461 bp (461 high quality bases) assembled on 2013-02-11

> FMO13108.5prime
CAGTCGACATGTACAAATTACTCGGTTTGATTGCCTTGGTGGCCTTTCCA
ATCGCTTGGATCCAGGCAGACTGTAATGTATGCCAGTCAAATGGAGCCTC
CTGCATCAACCAGACCGCATACAATTTGTGCTTCGGCTCCACTCAGCCGA
ATACCAACCAAACCTTCGTCTGCACGGATGGCCTGGTGTGCACGGACCAG
CCAGTGATCTGTTTCCAGAGGGGCGAGAATCCCGCCAGTTGCGGCGACAC
TGATAGCTGTGGCCAGTGTGCTCCCAACTACACCTTCGCCTGCACCTCGC
GCTCAACCTTCGCCTTCTGCTTTGGCGCCATAACGCCCACAAATGTGACG
GGCAGTTGCCCGGATGGTTACTTCTGTGACGCCTCCACCCAGGAGATCTG
CGTCACCAAGGCCACTGATGACTCCATCATCTGCCACTTGAATGCAAGCT
TTCTAGACCAT

FMO13108.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14958-RA 541 CG14958-RA 17..451 9..443 2175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3190119..3190533 29..443 2075 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:38:16 has no hits.

FMO13108.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:00 Download gff for FMO13108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14958-RA 1..439 9..449 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:09 Download gff for FMO13108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14958-RA 11..455 3..449 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:33 Download gff for FMO13108.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14958-RA 11..455 3..449 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:33 Download gff for FMO13108.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3190120..3190537 30..449 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:09 Download gff for FMO13108.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3190120..3190537 30..449 99   Plus