FMO13110.5prime Sequence
254 bp (254 high quality bases) assembled on 2013-02-11
> FMO13110.5prime
CAGTCGACATGAGTGGGGCTCACAGAGAGGCGATCCAAAAGCAGATCCAC
CAGGACTGGGCGAACAGGGAGTATATCGAAGTGATAACTGCCAGCATAAA
GAGAATCACCGACTTTCTGAACTCTTTCGATATGTCCTGTCGCTCCCGTC
TGGCGGTGCTGAACGAAAAACTAACGATCCTGGAGCGGCGCATAGACTAT
CTGGAGGCGTGCGTCGCCCAGGGTGAAACATTAACGGCAAGCTTTCTAGA
CCAT
FMO13110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HSPC300-RB | 584 | CG30173-RB | 56..283 | 9..236 | 1140 | 100 | Plus |
HSPC300-RA | 349 | CG30173-RA | 56..283 | 9..236 | 1140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24028614..24028734 | 129..9 | 605 | 100 | Minus |
2R | 25286936 | 2R | 24028018..24028125 | 236..129 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:28 has no hits.
FMO13110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:52 Download gff for
FMO13110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HSPC300-RA | 69..304 | 9..243 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:37 Download gff for
FMO13110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HSPC300-RA | 56..291 | 9..243 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:05 Download gff for
FMO13110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HSPC300-RA | 56..291 | 9..243 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:05 Download gff for
FMO13110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24028010..24028124 | 130..243 | 97 | <- | Minus |
2R | 24028614..24028734 | 9..129 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:37 Download gff for
FMO13110.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19915533..19915647 | 130..243 | 97 | <- | Minus |
arm_2R | 19916137..19916257 | 9..129 | 100 | | Minus |