Clone FMO13111 Report

Search the DGRC for FMO13111

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:131
Well:11
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34268-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13111.5prime Sequence

275 bp (275 high quality bases) assembled on 2013-02-11

> FMO13111.5prime
CAGTCGACATGTTCCGCATTATCGCTGTAATCTTCGCCCTGGTAGCAATG
GCTTTTGCTGCTCCTGGTTACATTGAGCCCTCCTACGGAGTGGTTCCTGT
GGCCCAGGTGGTGCCCGTGGTGAAATCTGTTCCGGTGGTGAAGCATGTTC
CAGTGGTGCAGCATGTTCCGGTGGTGAAAAATGTCCCAGTGGTTCAGCAT
GTCCCTGTGCTGAAGTCCTACGCTGTTCCCACCTATGGACACCACATCTA
CCATGGTGCAAGCTTTCTAGACCAT

FMO13111.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34268-RA 373 CG34268-RA 61..309 9..257 1245 100 Plus
CG34267-RA 375 CG34267-RA 79..309 9..257 860 90 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 501100..501336 21..257 1185 100 Plus
3L 28110227 3L 500080..500298 257..21 775 89.5 Minus
Blast to na_te.dros performed on 2014-11-28 18:37:31 has no hits.

FMO13111.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:53 Download gff for FMO13111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34268-RA 62..316 9..265 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:38 Download gff for FMO13111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34268-RA 61..315 9..265 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:06 Download gff for FMO13111.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34268-RA 61..315 9..265 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:06 Download gff for FMO13111.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 501100..501342 21..265 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:38 Download gff for FMO13111.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 501100..501342 21..265 98   Plus