FMO13112.5prime Sequence
500 bp (500 high quality bases) assembled on 2013-02-11
> FMO13112.5prime
CAGTCGACATGGGCCGTAACAACGTCATCTGCACGATCTGCTCGGAGCGG
TTTCGCACCTCGGACAATATACAAGCCGGCAGCTGCGGACACGCGTTCCA
CGAGGACTGCCTAGACCACTGGAGAAAGCAATCAAGGACTTGCCCTATCT
GCCGCAGCCAGGATGCCGCCTACTTTCAGCTTTATCTGGACTTTGAGGAG
TTTCCGGAAAGTGCATCGGCTCAGGGTGGCAGTTGGGGCGGCCATAATCG
GAGCCAAGGTCACAGCAGCAGCAGCAGCAGCTGCAGCAGCAACAACAACA
ACAGTAACGACAACAGCAGCAGTGACGATTATATTGGAATTATGAGGGAG
TACGAGAATCTACTTTACGAGACGGGCGTGTACCGAGAAGAGATCGAATA
TCTTAACCAGCGGATCGGAGCCCTTACTGTCCTCAATGCTGAACTCAGCA
AACTACATGAATGTTCGGATTCGGATGTTGATGCAAGCTTTCTAGACCAT
FMO13112.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4325-RB | 897 | CG4325-RB | 92..565 | 9..482 | 2370 | 100 | Plus |
| CG4325-RA | 583 | CG4325-RA | 92..565 | 9..482 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2043062..2043413 | 482..131 | 1760 | 100 | Minus |
| X | 23542271 | X | 2043606..2043727 | 130..9 | 610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:38 has no hits.
FMO13112.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:56:54 Download gff for
FMO13112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4325-RA | 85..568 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:43 Download gff for
FMO13112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4325-RA | 85..568 | 1..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:11 Download gff for
FMO13112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4325-RA | 85..568 | 1..486 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:11 Download gff for
FMO13112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2043058..2043413 | 131..486 | 99 | <- | Minus |
| X | 2043606..2043731 | 1..130 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:43 Download gff for
FMO13112.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1937091..1937446 | 131..486 | 99 | <- | Minus |
| arm_X | 1937639..1937764 | 1..130 | 96 | | Minus |
