FMO13113.5prime Sequence
713 bp (713 high quality bases) assembled on 2013-02-11
> FMO13113.5prime
CAGTCGACATGATAAATTACCGCACACATGAACTGAGTGGTTCGCCATCG
ATGCCCCGTCGCCGCCAGATCGGGCATACTTCCGGCCATTGTAATGTGCG
CTGCGATGGCTGCGGCAACAATAGGATGACCTTCTATCGCTACAAGTGCC
TGCACTGCCTGGACTATGATCTTTGCTCCGACTGCAAGGAAAATGGGGTC
TCAAACGGGTTGCACAGTCTGGATCATCCGCTCCAGTGCCTAATGGATCG
TGATGCACTTGAGCTGCACTTCGCCGGTGAGCCGATTCCGATATTGTGCG
CCGACAGCTTCACGTGCCCAGTGTGCGGTGAAATGGGCTTTTCCGTAGAG
GATCTGAGGACGCACTGCCAAGATAATCATCGCATGGCGCGCACAGTTTG
CATTTGCCCAGTCTGCGCGGCGGTCCCATTGTCGCAACCGAGTCACATTG
CTCACATTGCCAATCACTTGATGTTCTCGCCATCGCATCGCGCTACAGGG
GATCCGATGATCGATATCAGCGCCACTTCCCAGGCTGAGGGCTCCAGTTT
GCCCCAGAACTCTGCCGTGAGCTCTGGATCTGGCGCTCAACACACTTTTT
CCAGCTCGGAAAATTCCCAGGTGCGCTTCCTTCTACCCGGAAACAGAGCT
CCCTTAGCTGATTCCGACGATTTTAACATGGACAATTGGGAGGTAGCAAG
CTTTCTAGACCAT
FMO13113.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-RA | 1084 | CG3526-RA | 46..732 | 9..695 | 3435 | 100 | Plus |
| CG3526-RC | 860 | CG3526-RC | 115..776 | 34..695 | 3310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2893220..2893880 | 35..695 | 3305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:51 has no hits.
FMO13113.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:06 Download gff for
FMO13113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RA | 46..735 | 9..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:29 Download gff for
FMO13113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RA | 46..735 | 9..699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:50 Download gff for
FMO13113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RA | 46..735 | 9..699 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:50 Download gff for
FMO13113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2893132..2893158 | 9..35 | 100 | -> | Plus |
| X | 2893221..2893883 | 36..699 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:29 Download gff for
FMO13113.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2787165..2787191 | 9..35 | 100 | -> | Plus |
| arm_X | 2787254..2787916 | 36..699 | 99 | | Plus |
