FMO13114.5prime Sequence
527 bp (412 high quality bases) assembled on 2013-02-11
> FMO13114.5prime
CAGTCGACATGGAGAAGGTGGAGGCGGTAACAGTGTCCAATGTTGATCCC
TATAGGCGGATCCTAAACAAGGTGGTGTCCCAGCTGCTATTGGACAAGGG
GGCCGGCCAAGCGAGCAACCACAGCCTGGAGACGCTCACCCAGATGCTGC
AGGCGTTGATCTGGGAGATCGGCAATTCGGCGCATAACTACTGCGAGCTA
AGTGGACGCACGATGCCCACCGTGGGCGATGTCAGTTTGGCCCTGATTAA
CATGGGCATTTCGATCTCCAATTTGGATCCGTACATGCGCAAGGAGACGC
ACGTGCCCATTCCACTGCCCCCACAGCAGACGCAGCAGCGCCCGCTGAGT
CCTGCTGCAAGCGGGCATCAAGGCCCCGGCATCCCCCACTACGTGCCCAG
CTACTTCCCCTCCAATGCCCGATCCCCCCGCCCAACTTCGGACGCCCCAC
GCCCAAACAGCCCGGAAAAAAAGTAACAGGCCCTCAGGAAAAAGGCCCCC
TGCCCAAAAAGGGAAATCCAGAAAGGG
FMO13114.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf8-RA | 1341 | CG7128-RA | 90..599 | 8..523 | 2070 | 94.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18102268..18102628 | 157..523 | 1175 | 91.8 | Plus |
| X | 23542271 | X | 18102059..18102207 | 8..156 | 745 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:57 has no hits.
FMO13114.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:06 Download gff for
FMO13114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf8-RA | 81..508 | 1..432 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:32 Download gff for
FMO13114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf8-RA | 83..510 | 1..432 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:54 Download gff for
FMO13114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf8-RA | 83..510 | 1..432 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:54 Download gff for
FMO13114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18102052..18102207 | 1..156 | 98 | -> | Plus |
| X | 18102268..18102539 | 157..432 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:32 Download gff for
FMO13114.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17996085..17996240 | 1..156 | 98 | -> | Plus |
| arm_X | 17996301..17996572 | 157..432 | 97 | | Plus |
