FMO13201.5prime Sequence
275 bp (275 high quality bases) assembled on 2013-02-11
> FMO13201.5prime
CAGTCGACATGTTTCTGGGCTTCTTGGTGGATCTGCTGTACTGCCGACGC
TGCGGGGACGACTGTATGATGGAATTCCCATCGACTTCCGCGAATGAAGA
AGCAGCGCCGAAAGTGGTAAAGGTCGAACTGCCGCCGCTGCCGCCACTGA
CCTTTGAACTCATCCGCAATCCATTGGCTGCCGACCAGGAGTGCGATGAT
AGCTTCGAAGGCTTCGTCGATGGTTATGATGATCCCAGGCTGCCGGAAAC
CATCATCGCAAGCTTTCTAGACCAT
FMO13201.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3713-RB | 500 | CG3713-RB | 55..303 | 9..257 | 1245 | 100 | Plus |
| CG3713-RA | 987 | CG3713-RA | 55..303 | 9..257 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 846855..847103 | 257..9 | 1245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:40:03 has no hits.
FMO13201.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:19 Download gff for
FMO13201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3713-RA | 60..314 | 3..257 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:16 Download gff for
FMO13201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3713-RA | 49..303 | 3..257 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:30 Download gff for
FMO13201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3713-RA | 49..303 | 3..257 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:30 Download gff for
FMO13201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 846855..847109 | 3..257 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:16 Download gff for
FMO13201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 740888..741142 | 3..257 | 98 | | Minus |
