FMO13204.5prime Sequence
511 bp (304 high quality bases) assembled on 2013-02-11
> FMO13204.5prime
CAGTCGACATGACCATCATCGAGAGCAACTATATATCCGTGCGCGAGGAA
TATCCCGATATAGATAGTGAGGTGCGCGCCATATTGCTGAGCCACGCCCA
GAATGGAATCACGATATCGAGCATCAAGAGTGAATATCGAAAACTGACGG
GCAATCCATTTCCACTGCACGACAACGTGACGGATTTCCTGCTGACCATT
CCCAATGTGACCGCTGAGTGCAGCGAGTCCGGTAAGCGGATCTTCAACCT
GAAAGCGAGCCTGAAGACGGGTCACCTCCTGGATATGGTGCTCACCCAAA
AAGAGCGCACCAGCGACTACAGCAGCGGAACTTCCGTCCCTGGAAAAAAT
ACCCCGAGCCCTCCCCCCTACCGGAAAAACCCTTCCAAAGGAAGGGCTTG
GTCCCACTGAACCCCGCCCAAGAACGGGCCCAAAAAAGGAAAAAAAAACC
AGGGATTCCCCCCCGGCCGGTTTTCGGGCCCAAAGGGCCAGGGGGGCCGG
AAACCAAGGGG
FMO13204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| osk-RA | 2869 | CG10901-RA | 433..906 | 7..473 | 1700 | 92 | Plus |
| osk-RC | 2869 | CG10901-RC | 433..906 | 7..473 | 1700 | 92 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8935929..8936205 | 130..406 | 1005 | 92.4 | Plus |
| 3R | 32079331 | 3R | 8935558..8935684 | 7..133 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:40:11 has no hits.
FMO13204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:23 Download gff for
FMO13204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| osk-RC | 420..792 | 1..371 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:20 Download gff for
FMO13204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| osk-RC | 425..797 | 1..371 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:34 Download gff for
FMO13204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| osk-RC | 425..797 | 1..371 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:34 Download gff for
FMO13204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8935929..8936194 | 130..395 | 93 | -> | Plus |
| 3R | 8935550..8935680 | 1..129 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:20 Download gff for
FMO13204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4761272..4761402 | 1..129 | 96 | -> | Plus |
| arm_3R | 4761651..4761916 | 130..395 | 93 | -> | Plus |
