FMO13209.5prime Sequence
1145 bp (1010 high quality bases) assembled on 2013-02-11
> FMO13209.5prime
CAGTCGACATGCTAGATCTGGAGATCGTGCCGGAGATTTCCCTGGGCTGC
GATGCCTGGGAATTTGTGCTGGGCATGCACTTCTCGCAGGCTATCGCCAT
CATCCAGTCGCAGGTGGGCATCATCAAGGGAGTCCAGGTGCTGTACTCGG
ATACCACTCCCCTGGGCGTGGACATCATTATCAACCTGCCACAGGATGGC
GTTCGCTTGATCTTTGATCCCGTCAGTCAGCGTTTGAAGACCATCGAGGT
TTTCAACATGAAACTGGTGAAGCTGCGGTATTTCGGCGTATACTTCAATT
CCCCGGAGGTGCTGCCGAGTATCGAGCAAATCGAGCACTCCTTTGGAGCC
ACACATCCTGGGGTTTACGATGCAGCCAAACAATTGTTTGCTCTACACTT
TCGCGGGCTGAGTTTCTACTTTCCGGTGGACAGCAAGCTGCACTCGGGCT
ACGCCCATGGACTGAGTTCTCTGGTTTTCCTGAATGGCGCCTCACCCGTC
GTGTCCAAGATGTCTCTCTACGCAGGCAGCAATGTGTTGGAGAACAGGGT
ACCATCTCTTCCCTTGTCCTGCTATCACCGCCAGATGTATTTGGAATCGG
CCACTGTTCTCCGAACCGCCTTTGGTCACACGAAGGGTCTGAAGCTGAAG
CTCTTTACTGAGGGTTCAGGAAGGGCTTTGGAGCCACGCCGTCAGTGCTT
TACGCGAGAGCTGCTCTTCGGCGATAGCTGCGAGGATGTGGCCACCAGTC
TTGGAGCACCCAATCGTATATTCTTCAAGAGCGAGGACAAAATGAAGATA
CACAGCTCGAGTGTCAATCGACAAGCACAGAGCAAGCGAAGCGATATTTT
CTTTAACTACTTTACACTTGGCATCGATGTGCTCTTTGATGCACGGACGC
AGACCTGCAAGAAATTCATTCTGCACACCAACTACCCCGGGTCACTTCAA
CTTTAATATGTACCATCGCTGCGAGTTCCAGTTCCTGCTGCAGGCGGATC
ACCCTTCGATGAGTGATATGGTTCACCGATTTGGTGACGCCGACTTAGCA
GAACAATGTGAACATAACGCCCTACACCAATGGACGCGATCAGCAGCGCC
ATTGCCACCCTCAGACGCCATGGTGCTGCATCCGGTCAGTCTCGA
FMO13209.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7083-RA | 2029 | CG7083-RA | 306..1431 | 9..1132 | 5265 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8341153..8342253 | 9..1109 | 5155 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:40:45 has no hits.
FMO13209.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:27 Download gff for
FMO13209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7083-RA | 300..1442 | 3..1144 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:36 Download gff for
FMO13209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7083-RA | 300..1442 | 3..1144 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:46 Download gff for
FMO13209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7083-RA | 300..1442 | 3..1144 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:46 Download gff for
FMO13209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8341144..8342289 | 1..1144 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:36 Download gff for
FMO13209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8334244..8335389 | 1..1144 | 97 | | Plus |
