FMO13212.5prime Sequence
1145 bp (1057 high quality bases) assembled on 2013-02-11
> FMO13212.5prime
CAGTCGACATGAGCAACAAGAGCACTCCGGTGCGGCAGCGCATCCAGCAG
TTCCAGACGCGAGGAGTCCACAAATCCACGCCGGCATCCGAGATGCGCAA
GAAGGTGCTGATGACGCGGGCGGAGGATCGGGAGCACCGGGATCGTCCCG
AACAGCTGCTGAACACTGCATTCAGCGGGAGCACGCCACAGCCGAAGCCC
AAGCCCACGGCCCTGAATGCCTGCTACACACCCTCGTCGCTGTACAGGAA
TGCGAACTCTACTCCTGGAAGAGCAAAGACGCCCGGCACCGGGAAATCCA
GCTGCAGCAGGACAAAGGAGCGGGACTCTCTGATGGAGTCCTGCCTCAGC
GTGTCCGAGGAGAGCAACATGATTGTGGCGGTGCGAGTGCGGCCACTGAA
TGCCCTGGAATGCACACGTGGTCAGGTCACCAATGTGGTCCAGGTGCACG
GAAACAGCAACGAGCTGACTGTCCAAGCGGGCAGCAGTGCTGATGCCTCC
GCCGGCGTGACGCACTTCTTCAGCTACGACCAGGTCTACTACTCGTGCGA
TCCCGAACGAAAGAACTTCGCCTGCCAGGCCAAAGTCTTTGAGGGCACAG
CGCGTCCCTTGATCGACACTGCCTTCGAGGGCTACAATGCCTGCTTGTTT
GCCTACGGCCAGACGGGCTCGGGCAAATCGTACAGCATGATGGGCATTGA
AGCATTGGATGACGCCGCTCTGGATGGCGGACCGCCGCACGATGAGGCGG
GCATCATTCCACGCTTCTGCCACGAGCTATTCCGCCGCATAGAGGCTGTG
AAAAGTCAGCAGCAGCTGCAGGTGGAGGTGGAGGTCAGCTACTTTGAGAT
CTACAACGAGAAGATACACGATCTGCTGAGTGTCCAGCATGCGGCAGCTG
CCACCGGGGAATCCACGCTCATCCAGCAGCAACACAGCAGCAGCGTCCGG
CTCTAAAGGTCAGGAGCATCCCATCTTCGGGCCCTACGTAGTGGACTTGA
TGCCCACTCGGTGGACTCGTACTCGGCACCCCCGCAACTGGCTTGCCGTG
GCCACTCCAGCGGGCCCTGCCTCCACGCATGAACGACAGAAGCTCGCGCT
TCACACTTCCATCTTCAACAATGTTCTAAACCTACACGGAACCTT
FMO13212.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| neb-RA | 3592 | CG10718-RA | 98..1230 | 6..1133 | 5310 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20075854..20076986 | 6..1133 | 5065 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:40:00 has no hits.
FMO13212.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:18 Download gff for
FMO13212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| neb-RA | 95..1239 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:14 Download gff for
FMO13212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| neb-RA | 95..1239 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:28 Download gff for
FMO13212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| neb-RA | 95..1239 | 1..1145 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:28 Download gff for
FMO13212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20075851..20076995 | 1..1145 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:14 Download gff for
FMO13212.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20075851..20076995 | 1..1145 | 97 | | Plus |
