FMO13217.5prime Sequence
1140 bp (1044 high quality bases) assembled on 2013-02-11
> FMO13217.5prime
CAGTCGACATGTGGGAAAAGCTGGTGAACTGCATCAAGAGCAATGGTGGC
AATGGTGGCGTCAAGAATGTAAGCTGCCAAGTTGTCGAACTGGCGGATCT
GATGAAACAGGTGCCGCCGAACCAGATGCACAAGTTCAAAATGTTTGCCA
AGAAGCACGAGGAGTACAAGGACCGCGTTCGTAAGTATCCGGAATCGATG
CCGACAATCGACTGGGAATACTACCGTCAGAATGTGAGAGAAGAGTTTGT
CGATTGGGTGAAGGGATACGAGACCAAGTATGATAAATTGCATTCCGTAT
TCGAGAATCGACATGCCATAGTAGATCACAAGCGATACTTTGAACTCGTC
GATGAAGAAAAGAAGGTGGTGACAAAATGTATTAGCGAATACAAGGCGGA
GTCGGATAAAAGAATCCAGGAGCTAACCGAAAAGTTGGAGTTCGTGAAGG
CAATGCGACCCTATTCCGAAATGACCATGGAGGAATTTTGTTTTGCCCGT
CCGCACTTGGCACCCGATTTCATCAACAAGCCCACTTTCTGGCCACACAC
TCCTGAAGAGCAAATGCCAGGTCCATCGGATCCAGAGGCAGCAGCTGCTT
TGCATCACGAAGAGGAGCCCGAACCGCCAAAGAAACCAGCTCCCGAAAAG
TTACCAGATAAGCCTAGTGGAGAAGGAAAGCCTCCGGCGGCTGCGGCTCC
AAAGGAGCCAAAAGAACCCGTTGTCGACACCTCTCAGTTGGCCGAAAAGG
CCACTTTAATCGCCAAAGATTTGATGGCCAAAGCTATTGTTCTTTTTAAT
AGTCTTAAAGAAAAGATGTCGGGTCTGGCCAAGAATGTTCAGAAAAAGGC
AGACGCCGCCAAAGCTGCGCGTTCCGAAACTGCCAGCAAATCCGCAACGC
CTACAGCCGCACCAACCAAGTCACTGGACAGCATTACGGAACGAGAGTCT
GGACCGAACATCTGCAACCAAACTATATACGCAGCGAGGAGCAGAGGCCA
TCCGGAGTTAAGCCAGCCATACTAACCTTTCCATTGAGGCGGATCTGGCA
TGCCAGAGAGGAGCAGCCGGGGAAATAGCTAGACTGAACGCAAGAAAACA
TTAAAAGAGGCCGAGAATGGTGAACCAGACTAAAGATCCT
FMO13217.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7813-RA | 2375 | CG7813-RA | 81..1205 | 9..1120 | 5130 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16498142..16499019 | 1045..173 | 4130 | 99.1 | Minus |
2R | 25286936 | 2R | 16499186..16499349 | 172..9 | 820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:27 has no hits.
FMO13217.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:35 Download gff for
FMO13217.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7813-RA | 78..1122 | 2..1045 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:05 Download gff for
FMO13217.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7813-RA | 78..1122 | 2..1045 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:11 Download gff for
FMO13217.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7813-RA | 78..1122 | 2..1045 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:11 Download gff for
FMO13217.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16498142..16499019 | 173..1045 | 99 | <- | Minus |
2R | 16499186..16499352 | 2..172 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:05 Download gff for
FMO13217.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12385647..12386524 | 173..1045 | 99 | <- | Minus |
arm_2R | 12386691..12386857 | 2..172 | 97 | | Minus |