FMO13234.5prime Sequence
482 bp (482 high quality bases) assembled on 2013-02-11
> FMO13234.5prime
CAGTCGACATGTTCTCGAGATTAGCCTTACGTCCTTTGACTGTGGCCACA
TCTCGTTCGGCTACCACCCATTCCGCCCAAGGACTAAGTAGGCTCCCTGG
GCATGGAAGTCCCGGAAAGGTTCGCCCGGGTTTCCCGTCCGACAATTGGG
TTAAAGGACCCATGGGCGTCGGCCTGTTGGCATATATCTGTTCCGGAGAC
TGTTGCGCCATTAAGCACGAGCACAGCGGCCTATCCTTGGGCATCATGGA
AGATGGCTACTACAGCAGTGGAATCACCATCGGTATCCTGACCACATTTG
CTGTGATTAGGCTTCTTCCAGCGATTGTAAAGTGGGCTGATAGCGAGATT
ATTAAAATTGAGTCCGAGTACGAAAAGAGTCGTGAAACTAAGATCAAGGT
CCTATCAATCTCGCCCTCGAACGGAAATAAGGATCCTAGCAAGGATAATG
CCGATCAAAACGTGGCAAGCTTTCTAGACCAT
FMO13234.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17300-RA | 699 | CG17300-RA | 124..579 | 9..464 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13086744..13087075 | 353..22 | 1660 | 100 | Minus |
| 3L | 28110227 | 3L | 13086507..13086617 | 464..354 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:58 has no hits.
FMO13234.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:41 Download gff for
FMO13234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 117..579 | 1..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:28 Download gff for
FMO13234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 117..579 | 1..464 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:28 Download gff for
FMO13234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17300-RA | 117..579 | 1..464 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:28 Download gff for
FMO13234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13086507..13086617 | 354..464 | 100 | <- | Minus |
| 3L | 13086744..13087072 | 25..353 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:28 Download gff for
FMO13234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13079607..13079717 | 354..464 | 100 | <- | Minus |
| arm_3L | 13079844..13080172 | 25..353 | 100 | <- | Minus |
