FMO13235.5prime Sequence
1155 bp (1011 high quality bases) assembled on 2013-02-11
> FMO13235.5prime
CAGTCGACATGGCCAAGATCATTCAAATGGCGGTGATGCTGGGCAGCTCC
AAGCTGGGCCACGGCGCCTTTGGATTCGATGAAAGGCAAGCGGACTCGAC
TCCAGTGCCACAGATGAAACGGGAGCTGCCCACGCGAAAGATGTGCCTGG
AGGCCTTTAAGCGAACCCACTACGACATCCTCATCATTGGCGGCGGCGCC
GTGGGTTCCGGCTGTGCTCTCGATGCTGCCACGCGGGGCTTGAAGACCGC
CCTGGTGGAAGCGAATGACTTTGGCAGCGGCACTTCCTCCAAATCGAGCA
AACTGTTGCACGGCGGCCTCAGGGATCTGGAGCAGGCCATCTCGCGTCTG
GACGTGGCTGCCTTTCGGCGTGTTCGCTGCTCCTTGCAGGAACGCAGCCA
CATTGGCAAGCTGGCGCCGCATCTTAGCCAGCCGGTCCCCATCCTGCTGC
CCGTCCACCACTGGTGGCAGGCTCCGCTCTACTACATGAAGCTAAAGATT
TACCACCTGATGGCGCCCAAGGCCACCAGGAGTTTTCAGTATCTGAGTGC
CGACGACGCGTTGGAAGTATTTCCGATGCTGCGACGCCAGGAGCTGTTTG
GCGCCTTCGTCTTCTACGAGGGTCAGCACGACGATGCCAGGATGTGCCTT
TCGGTTGCCCTTACAGCGGCTCGTTACGGAGCAGATATCTGCAACCACAT
GAAGGTCTCGAGACTCATCAAGAACAAGGATGGCAATGTGGCGGGCGCGG
AGGCGGTGGACCAGCTGACGGGCAAGAAGTATAGCATACGGGCGAAAGTG
GTGGTCAACGCCACTGGCCACATGAGCGACAGCCTCCGCCAGATGGAGGA
TTCGGAAGCCAAGCCGCTCTGCACGCGCAGCTGGTCCTCGATCATCGTCA
TGCCCCGCTTCTACTGTCCGGAGGAGTGGGCGTCTTCGACCCGCACACGG
CCCTCTGGACGATCCATCTTTTTCTGCCCTGCAGGGGCATACGCTAGTCG
GTTCCAGCGATGGGCCTCTCAATCTGCCCGAGCAGACACGCAGCCCACGG
AAACGAATGTGCAGTCCCTACTGGAATGCGTTAAGCACTTTGTAACGCCC
AACTTCAAGTGCAGATGCGAATGGTCCTGGCCGTTTGGGGTGATTACACC
TTCTG
FMO13235.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2137-RA | 2379 | CG2137-RA | 123..1267 | 8..1148 | 5350 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7536041..7537142 | 8..1106 | 5160 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:03 has no hits.
FMO13235.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:42 Download gff for
FMO13235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2137-RA | 123..1275 | 8..1155 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:32 Download gff for
FMO13235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2137-RA | 123..1275 | 8..1155 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:31 Download gff for
FMO13235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2137-RA | 123..1275 | 8..1155 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:31 Download gff for
FMO13235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7536041..7537193 | 8..1155 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:32 Download gff for
FMO13235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3423546..3424698 | 8..1155 | 98 | | Plus |
