FMO13236.5prime Sequence
812 bp (812 high quality bases) assembled on 2013-02-11
> FMO13236.5prime
CAGTCGACATGTCGAATCTGTACACCGAATTGAAGAACGAGTGGAGCAAA
CATGCGCCCAACCTCACCCACTGCTCCCGCCTCCTGGATGGCTTCAAACT
GGAGCTGGTGAGGTCCAACTTTGGAACAATCCAAACTGCATCGAGTTCCA
AGCAAAAGGATCAGCTAATCAAATCGCGGGAGATGCTGGAAATCGCCGTG
GAACATAGCATCACCATCAAGGATTATGCTGCCTTCGAGAGATATATGGC
CCAGTTGAATACCTACTACTATGATTACGATAAGTACTTGGAATCATCGA
AGCACATGTACAAGTTCATGGGCCTAAATCTGCTATATATGTTGGCCACG
AATCGCCTTGCCGACTTCCACATCGAACTGGAACGTTTACCGACGGCTTT
GCTGCTCCATGATAGCTTCATCCAACCCGTTTTGGCTTTGGAGAACTACT
ACATGGAGGGCAGATACAACAAGATACTGCAAGCCAAGAAATCTATGCCC
TCGGAGATCTATTCGAATTTTATGGACATCCTGGTGAACACGGCGCGTGA
GGAGATCGCATCCTGCATGGAGAAATCCTATCTGAAGATGGCGCCCAAAC
TAGCTGCTCAGCGTTTGGGCCTTCGTCCCGGTTCCAAGGAGCTTTTCGAG
CTGGCGACTAAGCGCCAGTGGTGTCTGGACGAGGAGGGGAACTACGACTA
TGCTGGACTTCATACCAGACCCATGGAGAAGGTCCCTGCCAAGGACATCG
CCACGCATAATCTCACTTATGCCCAAGAGCTGGAGAAAATAGTTGCAAGC
TTTCTAGACCAT
FMO13236.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpn12R-RA | 940 | CG11552-RA | 66..852 | 8..794 | 3755 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15041719..15042505 | 794..8 | 3755 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:42:08 has no hits.
FMO13236.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:57:43 Download gff for
FMO13236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn12R-RA | 59..862 | 1..805 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:36 Download gff for
FMO13236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn12R-RA | 59..862 | 1..805 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:33 Download gff for
FMO13236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn12R-RA | 59..862 | 1..805 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:33 Download gff for
FMO13236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15041709..15042512 | 1..805 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:36 Download gff for
FMO13236.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15034809..15035612 | 1..805 | 97 | | Minus |
