Clone FMO13237 Report

Search the DGRC for FMO13237

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:132
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12907-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13237.5prime Sequence

497 bp (497 high quality bases) assembled on 2013-02-11

> FMO13237.5prime
CAGTCGACATGCTGTCCTCCGCCACCGCCTCCCTGTCGCCCGCCGCCCAC
CTTGTGGCAGAAATTGAACTGCGTTCCGTGCAACCGTTTTGTGTTCTTCA
TGATCGGGGCGGGCATCGGATTATTCTGGGACCATATGAAGAAGGAGGCC
CAGAAGGCGGCCGAGGAGGCCGCGAAATCGCCCAAGGAGAAGGAGAAGGA
GGCCAAGGAGCGCGAGAAGAAGCAGAAGGAAAAAGAGAAGGCCGAAAAGG
AGAAGGCGGAGAAGGAGAAGAAGGAGAGGGAGAAGAAGGAGAAGGAAAAG
AAGGAGAAGGAAAAGAAGGAGAAGGAGGCCAAGGGCAAAGAGAAGGGCAA
GGAGGGCAAGTAACGACTATAGACCCCCAAACGGACATGTCAAGGAGCAG
GATGTTTTCCCCCAAAATTCTCATCGAATCCATATCGTTTCTAAACTTCA
AAATTTTCAAGTGCATTATATGGCATACCGCAAGCTTTCTAGACCAT

FMO13237.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG12907-RB 1014 CG12907-RB 181..651 9..479 2355 100 Plus
CG12907-RA 945 CG12907-RA 181..651 9..479 2355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10353551..10354021 9..479 2355 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:23:03 has no hits.

FMO13237.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:19 Download gff for FMO13237.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12907-RA 179..657 1..483 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:27 Download gff for FMO13237.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12907-RA 179..657 1..483 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:18 Download gff for FMO13237.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12907-RA 176..654 1..483 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:18 Download gff for FMO13237.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10353546..10354024 1..483 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:27 Download gff for FMO13237.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6241051..6241529 1..483 98   Plus