FMO13242.5prime Sequence
1150 bp (1049 high quality bases) assembled on 2013-02-11
> FMO13242.5prime
CAGTCGACATGATCGAAAATTCGTTTAAAATGGAAATGCACTTTAAAAAC
CGTTGGCAAGCGGCCAGCTTATTTTTGCGCTATCCTCGCACGGTCACACT
GTGCTTGAGCGGTAAAAGTGGCGATATGGACGAATCGGTCAATTTAAGCA
CCAGCATGGGCGATGTGGAGGCATCCATGCTGAATCACAACGTGAGCTTC
AGCAGCACCATGGTCACGTCCAATGGCGATCTTTCGTTGCCCAAACTGAG
CGTGACTCTTTCGGCGGAGGAGATCCTAAAGCTGCGTTCCGGGCGTCCAA
AGAACGCCGTTGAATCGCCGCATGCGGGTGTGCCCATGGAGACAAGCCTG
GCTGCCGAGGAGGAAGCGAATGGGGATGAGGAAGAGGAAAGCGTGCGGGT
CGTCGACATAGAGGACACTTTGGAGCTGACGTCGAATGGCAATGAGGCGA
AGCCGGAAGACCAGGAGCTTGCGATTGCTCCCGTCCTCCAGTACTTCCAG
GGAGCACTTGTTGAGTTGGGCCGACGCTGCTGGACCTCGTCCACGGAGGC
TCAGCACTACACCAAAGGCTGCTACTGGTCCCCGGACGGCACGTGCCTTC
TGGTGCCCGTTCACCTAGATGGCATGCACGTTATAGAGATGCCCAGTGAC
CTCTACTCCGCAGATACGGTGCAGCCGGCACGCTCGCTGACCAAGCTCCA
GTCGGAGGTGCACGTGCCCGAGGGCGGAACCGTCTACGACTGCGTCTGGT
ATCCGCACATGAACAGCCTGCAACCAGAAACCTGCTTGTGGCTGGCCACG
CGGCAGCACGAACCCATACACATGTGGGATGCCTTCGACGGTTCCCTGCG
ATGCAGCTACAGTGGGTACGATGCCGTAGACGAAGTAATGGCGGCCATTT
CCTTGGCCTTCTCCCATGACGGCGAGCAGATCTATGCGGGATACAGCGCT
GCATCAGATCTTCGACACCAGCAGACCCGGACGTTTTGCGACGATTACCC
TGTCAGTTTGCCATATCCTGCATTGCCCAGACACTGCGCACCGCACCTCT
ACTGCGGCACCTGGCCATGGCTACATCCAGCACTTGACTTGGCGGTGGTT
GCCCAAGCAATCTCTCTTCACGCCTTGGAGGTAGGTCGATCAACACACTG
FMO13242.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
WDR79-RC | 1724 | CG9226-RC | 40..1165 | 9..1123 | 5150 | 98 | Plus |
WDR79-RB | 1602 | CG9226-RB | 1..1043 | 92..1123 | 4735 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6126899..6127553 | 790..136 | 3245 | 99.7 | Minus |
2L | 23513712 | 2L | 6126655..6126843 | 974..788 | 845 | 98.9 | Minus |
2L | 23513712 | 2L | 6127610..6127736 | 135..9 | 635 | 100 | Minus |
2L | 23513712 | 2L | 6126479..6126597 | 1085..973 | 205 | 91.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:23:31 has no hits.
FMO13242.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:23 Download gff for
FMO13242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
WDR79-RA | 27..1159 | 9..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:45 Download gff for
FMO13242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
WDR79-RB | 1..1050 | 92..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:35 Download gff for
FMO13242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
WDR79-RC | 40..1172 | 9..1131 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:35 Download gff for
FMO13242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6126655..6126843 | 788..974 | 98 | <- | Minus |
2L | 6126902..6127553 | 136..787 | 99 | <- | Minus |
2L | 6127610..6127736 | 9..135 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:45 Download gff for
FMO13242.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6126655..6126843 | 788..974 | 98 | <- | Minus |
arm_2L | 6126902..6127553 | 136..787 | 99 | <- | Minus |
arm_2L | 6127610..6127736 | 9..135 | 100 | | Minus |