FMO13248.5prime Sequence
1001 bp (793 high quality bases) assembled on 2013-02-11
> FMO13248.5prime
CAGTCGACATGGCGTTCTCCACACAAAAAGAGTTCTTTCACGTACCCTTC
AACAATGAGACATACGAATTTGAGTGTGTCGATGCGTGTGTTAAACTTAA
GAGGTATCCATCCACAGTTGACGACAGATCATGGTCAGCAAACGAAGATA
TGAAGTCACAGTTCGTGGCTGACCTGGTGGCCTGCAACTCACCGATAAAG
AAGGACCGTGGTGCCGAGCCTACCGCTAGATCTGCTCCATTGGGTCCTGA
GGATGAGTACGGCAGTAATTTAGTGGTGGGCGACAGTTTAATAAATGCCG
CGGACGACACAATTGGTCGCATGCAGGATCTGATGATCAAGAATAATATT
CTAAAGAAGAAACTGGCCGATTCTGATGATAAATTGAGGACAGCCAACCA
GGAGACCGCCGAGATCAAGCGGATTATGGACCAGCGCTATGACCCCGACA
AGAGCAAGGCTCTAAAAAAGAAAATCGAGCAACTGGCCGATGACAACTAG
ATAACTCCGCAGGACGAGAAGGAACTGAGCGGTCTGCAGGCGGCCATTGA
CGACATGAACAAGGCACACGACATCCTGGAGGCTGAAAATGCCAATCTAA
AGCGGCTGCTCGAAAAACAATCGAAGCGCTGCAAGATGGATAGCATTAAA
GTCGATCCGGAAAAGAGCAACGATATACCCTACCTGCAGAAGAAGATCGA
CGACTTGGGTAAAGAGGTGGCGCTACTGCGTGAGTTCGAGGACGAAGTCA
TGAAGCGTTGCGCCAAAAGTGCGGTGCTGAATGTGGTGGTGGTGATGGAG
GTGGCAATGCTGTGCGTGCCGCTGCGGGTCTCCTGTACAGGCAGTTTCTC
GCCGACCAAGATGCGACACTCAAGCTATTCTACCGATCTCGATGCCTTGG
CAAGAAATCTAATGAACTGGAGTGCTCGACGACATTTTCAATCCCTGAAA
GAAACGCCAATGATGCGAACGTCTGACTAGCACTCTGATGATATCATCGA
A
FMO13248.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31161-RB | 1666 | CG31161-RB | 180..1152 | 8..967 | 4000 | 95 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22616690..22617513 | 8..830 | 3920 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:22:59 has no hits.
FMO13248.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:17 Download gff for
FMO13248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31161-RB | 180..1040 | 8..864 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:24 Download gff for
FMO13248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31161-RB | 180..1040 | 8..864 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:16 Download gff for
FMO13248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31161-RB | 180..1040 | 8..864 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:16 Download gff for
FMO13248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22616690..22617550 | 8..864 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:24 Download gff for
FMO13248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18442412..18443272 | 8..864 | 97 | | Plus |
