FMO13250.5prime Sequence
614 bp (614 high quality bases) assembled on 2013-02-11
> FMO13250.5prime
CAGTCGACATGGCTCTACGAGTGCTATGGAGGCGAATGACGAATGCCATG
GACCGGTTTCATCAGATAGCCTTCAGCCCAAAGTATCTCCTATTTACGAA
CATCGGGATCTCTGTGGGCCTGAGCATGGTGGGCGATACCATGGAGCAGT
CCTATGAGCGCCTCATAGGGGAGCTTCCGGATTGGAACCGAACGCGTACC
ATTAGGATGGGCATATCCGGGTTGACGGTGGGCCTGGTGTGCCACTATTG
GTACCAACATCTGGACTACTTGTTTCCGAAGCGCACCTATAAGGTGGTTG
TAGTCAAGATTTTGCTGGACCAGTTCATCTGCTCACCCTTTTACATCGCC
GTATTCTTTCTCACAATGGCCATTCTGGAGGACAATACGTGGGAGGAGCT
GGAGCAGGAGATTAGGGAGAAGGCCTTAGTACTGTACGCTGCTGAGTGGA
CCGTGTGGCCATTGGCACAGTTCATCAACTTTCTGCTGATCAAGCCGCAG
TACAGGGTATTCTATGACAACACCATCAGTTTGGGCTACGATATCTATAC
GTCTCAAGTTAAGTATCGTAAGAAGCCGGAGCCAAAAGATAATTCGGCAA
GCTTTCTAGACCAT
FMO13250.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5906-RA | 849 | CG5906-RA | 69..656 | 9..596 | 2895 | 99.5 | Plus |
| CG1662-RB | 1603 | CG1662-RB | 824..960 | 406..542 | 205 | 78.4 | Plus |
| CG1662-RA | 1282 | CG1662-RA | 991..1127 | 406..542 | 205 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11870650..11871237 | 596..9 | 2895 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:24:08 has no hits.
FMO13250.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:31 Download gff for
FMO13250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5906-RA | 69..659 | 9..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:08 Download gff for
FMO13250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5906-RA | 69..659 | 9..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:00 Download gff for
FMO13250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5906-RA | 69..659 | 9..600 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:00 Download gff for
FMO13250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11870646..11871237 | 9..600 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:08 Download gff for
FMO13250.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11863746..11864337 | 9..600 | 99 | | Minus |
