FMO13256.5prime Sequence
1126 bp (1039 high quality bases) assembled on 2013-02-11
> FMO13256.5prime
CAGTCGACATGACTCTGCTTTCGGGCGCCAACTCGGTGGGATATCCCAGT
CAAATGCCGGCGAAAAGGATCAGCTGGCGGCGTTTGGTGGCACTACTGCC
GAATTCGATAGGTTTGTCATTAAAACCGGTGACGCCTCATTTGAGGGACC
TACATCTCGTCCAGCGCCGTCTCCAGGACGATTTTCTGGGCTGTGAGGCT
CTGTGGACAATTTTTATGGCCGCCGCCTGGAGTTATCGCTACAGAACGCG
GCTGAGACCATTTCCCAGCCACTGGAATACCATAGATTTGGTTTTTAATA
CGCTGGGTGATGCACCCAGACTGGAGGTGCTGCAGCAGCAGCTCATGCAC
TGCGACTATCAGGCCTGCTCCCCCAATGTGGTTCGTTTGCTAACGGACAT
CCTGGTGGATCAGGCCGATCGCGTGTCCTTGAGCTCACTGCGACCCTGCG
AGTTCCAGGAGCTGTACGCTCACCTGGGCATGTCGCCGCCCAAGCAGCCA
CCCACCCAGATCTTTGAGGTGCGAACAGGCAAGGGCAATGAGAAGGGGGA
GGCATATGCCAGTTTGCGGCAAGAGAACAAGGAATCCGTTCGCCTGGGCT
TCTATGGCTGCAAGCTAGAGAAGGTTTATGCGCTTCTGAATTCCCAAAAT
TCCCTGGACAATGGAAAGTATCTGGAGCTAACCTGCGATATCAATGAAGC
CCTGGCCAGGAGTAAGCCCCAGGCTGGCGTGGGTGGCTCCCGTTGCGGAT
CGATACTGCGTTGCGTGGCTGTGGTAGAGTTCGTCTTCCAGGACAATGAA
ACCAGCCGCGATAAGAAGCAAGTGATCATCAAGGATGCGAACACCATGCA
GGTATCGTATCTACTATTGTACGGCCAAAGCTGCATGAATACGCAATGGA
GCGACAGATCAAGCTGATGGCGGAGCTAGCTCGAGAACTGCTCAATTGGC
TGGAAAGATACCACAGAAGGCATATCCTTGGGCGTTGGCCTGCTGATCGT
TTCATCGATGGCCATTTCGAGCACTTTCTTTCCGCCTGTTGCTCCACTGC
TTCTACGTATTCAGCCGAGAATTTTGGCAAGCCTTCTGAACCATTCGTTG
GGGCGCGGCCAGGAAGGTCTATCTAT
FMO13256.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15925-RA | 1527 | CG15925-RA | 279..1349 | 1..1063 | 5030 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16446264..16447279 | 1..1013 | 4840 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:24:45 has no hits.
FMO13256.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:37 Download gff for
FMO13256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15925-RA | 279..1363 | 1..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:33 Download gff for
FMO13256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15925-RA | 279..1363 | 1..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:19 Download gff for
FMO13256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15925-RA | 279..1363 | 1..1076 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:19 Download gff for
FMO13256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16446264..16447348 | 1..1076 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:33 Download gff for
FMO13256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12333769..12334853 | 1..1076 | 98 | | Plus |
