FMO13259.5prime Sequence
737 bp (737 high quality bases) assembled on 2013-02-11
> FMO13259.5prime
CAGTCGACATGCTTAGTTCAAAAAGTGACACTTCTGGAGACGATATCTCT
ATAACTGCACAAGCAGAAAAAAGAGTGGATGATAGCATCAGAGCGCCATC
TATTGGCTGGAATGCTGAGCACAAAGATGTTCAGATTCCAAGGGACCAAC
TAACCCACAGGCAGATCAGCAAGTGCAATTTGTTTGAGGAATACATCAAG
CTCCCAAAGAGTGAATATGGACAAACAAGCCGCATGAAGCGATTCCGATC
CGAAGAGTTAGCTATTAAGCAAGAAGATCAAATCGTGGAGCATAGATCAT
CGAGTCTTTCGCGGCTATCGGATGTCACAATCAAGCCCACCTGCGAGGTG
AGTAGTCAGACTTCGTGGACAGCAGCGGACGAGAGTAATATGAATAGCAA
GGATTTGGAGGCGAAGCTGGCGGCTGTACGCGGCGGTGGTATCGATCTCG
AAACGGACAAGCCCAGCAAGATCCAGCAGCACACGATCCACATCGAGGTG
GAGTCGGTGACATCGGCCACGGCTATGCAAAGACCCCCACTGCACCAAAG
GATGTGGCAGGTCCTTGTGCAGACGGCGGATACGATTGTCGCATTCGCCT
CTATAATCGGCGAGAATTTAACAGTGGCACTCTTCATTGTCCTGTGCCTG
TGGTGCCTTTACCTCTTACTAAGCCACTTTTATGGCAACTTGCAGACCAA
TGTCGGCATGCCGTCCAAAGCAAGCTTTCTAGACCAT
FMO13259.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-RA | 835 | CG16852-RA | 48..760 | 7..719 | 3565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13541124..13541571 | 272..719 | 2240 | 100 | Plus |
2L | 23513712 | 2L | 13540798..13541064 | 7..273 | 1335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:23:56 has no hits.
FMO13259.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:28 Download gff for
FMO13259.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 42..765 | 1..727 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:59 Download gff for
FMO13259.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 42..765 | 1..727 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:52 Download gff for
FMO13259.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 42..765 | 1..727 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:52 Download gff for
FMO13259.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13540792..13541064 | 1..273 | 98 | -> | Plus |
2L | 13541126..13541576 | 274..726 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:59 Download gff for
FMO13259.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13540792..13541064 | 1..273 | 98 | -> | Plus |
arm_2L | 13541126..13541576 | 274..726 | 99 | -> | Plus |