FMO13261.5prime Sequence
1095 bp (1043 high quality bases) assembled on 2013-02-11
> FMO13261.5prime
CAGTCGACATGTATGAGTTTCCGCTGCTAAAAACCGATGGCCTTCGCGGT
GGCGTCGTCTACTATGATGGTCAGGTGGATGATGCCCGGATGTGCGTCGC
ATTGGTGATGACCGCGGTGGCCCTGGGCGCCAATGTGGGCAACCACATGG
AGGTGGTGGAGATTATGCCACAGGAGGGATGCTGCCGAGTTGTTAGCGTT
AAGGACAAGATCTCCTGCGAGCAGTTCTACATTCAGTCCAAGGCCGTGAT
CAATGCCACAGGCTCCAGCACAGATGCCATCCGGCAGATGGACAAGGAGG
GAACCGCACCCATTCTATTGCCCACTCTGGAAACCCAAGTATCCCTGCCC
CGCTACTTTGGTTCCGGACATTACGGTTTGTTGAGTCCGGCTCTGAAAAA
TGATGATCTCACTGTATATATGGTGCCGTTTGAGAACCACATGGTTCTAG
GCAGTCGCGAAGTGGACCTCGATGAAGTGTCTAGCCGTGGAAGTCCCACT
CCCGATCCAGATGACGTGGATTGTCTGCTAGAAGCAGCCAAGAAAAGGAT
GGATCCCTGCGTGGAGCTGGGGCGCTGTCACGTCCTTAGTGCCTGGACGG
CGATCAAGGCCAGTGTGAGCTGTCCAACCGACAAGGAAAATGATGATGAC
AAGCGTGGAACACCGATCAACAGCTATATGATCGAGGTTAGTCCCGACGG
TCTTATCACGCTGGCCGGCGGACGGTGGAGCAGTTACCGCGTGATGGCAG
CCGATGCCGTGGATTTGGCCATTAAATCTTGTGGACTATGCGACGATCAT
GTGACCTCCAGTTGGACACAGGACTTGAAGTTAGACGGAGCCGATCATGG
TGTTGCATGCTGCCGCTAGAATTCGTGCAGGACTACGTGTGCCCATGGAC
GTGGCGCATCATATCTCGATTCCTATGGGTACAATGGACATGCACTGTTT
TCTCAAGCTTCTGATCTGAGAGCGCCTTCAATCCGAGCTTCCCCTATATA
GAGGCAGAGATTCAGTATGGCATGCGAAATGAAGTACGCCTGCCCTGTGG
AAATCATCGCCACGACGGATGGCGCATAAGACCTCTGGGAAGCGG
FMO13261.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-RD | 2316 | CG7311-RD | 747..1821 | 8..1078 | 5000 | 98.2 | Plus |
| CG7311-RE | 2294 | CG7311-RE | 725..1799 | 8..1078 | 5000 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13709014..13710052 | 8..1043 | 4800 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:25:11 has no hits.
FMO13261.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:42 Download gff for
FMO13261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RA | 739..1821 | 1..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:50 Download gff for
FMO13261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 717..1799 | 1..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:31 Download gff for
FMO13261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 717..1799 | 1..1078 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:31 Download gff for
FMO13261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13709006..13710088 | 1..1078 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:50 Download gff for
FMO13261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13709006..13710088 | 1..1078 | 97 | | Plus |
