FMO13262.5prime Sequence
566 bp (566 high quality bases) assembled on 2013-02-11
> FMO13262.5prime
CAGTCGACATGTCGCAACTGATGGAGATGACCCGCCACGTGACCTCTTGG
CTTGGCTGGACACCGACGCCCACATGCGACGTCGCGGAGGAGGAGGAGCC
GCTGCAGGAATCGTCCGGCATTGTGACCGTACTGGTTCTCTACCTGGGCA
TGGCCGGCATCTTTGCGGCCCTGAGTCTCTGCACCACGACCAGCGACGAC
CAGGTGCGGGCCCGGGCCAAGCGGGAACTGATGGCCATGGAGCGCCGCCA
GTTGCAGCGTCTGGAGCGGCAGGGCAGGGCAACGGGGTTAACTCTGCTGC
CAAACTGGACGACCGCCATGCCATCGCTTATTCGCGAAGTGGCTGCTCCT
AGGCCTTCAGTCATTCAACTGGAAGAGCAGCGCTTGCGGATGCGTCTGCT
CCAGCTAACGGATCAGAAGGAGCAGGAGGAGCACGATTCCCAGGATTGGC
ACGATGCTGTGGATGCGCCAGAGGAGGAGCAGGCCACCAGTTGCCTCGCC
CCCAAGAGCCAAAATTCCACTTTCTTTGACCTTCCCTTAGACTCCGAAGC
AAGCTTTCTAGACCAT
FMO13262.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2533-RA | 772 | CG2533-RA | 136..675 | 9..548 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11603340..11603879 | 548..9 | 2700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:25:18 has no hits.
FMO13262.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:43 Download gff for
FMO13262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2533-RA | 136..682 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:54 Download gff for
FMO13262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2533-RA | 136..682 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:35 Download gff for
FMO13262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2533-RA | 136..682 | 9..555 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:35 Download gff for
FMO13262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11603333..11603879 | 9..555 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:54 Download gff for
FMO13262.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11497366..11497912 | 9..555 | 99 | | Minus |
