FMO13269.5prime Sequence
1002 bp (1001 high quality bases) assembled on 2013-02-11
> FMO13269.5prime
CAGTCGACATGACGGGTTCGTTCAGTGTGAAGCTCAAGTCCAAAAAAGGT
CAATTCATTGTCAACGACCTGAACGAGCATACGACGCTGGGGGAGCTGAA
AACGAAAATAGTCCAGGCCACCGACATCGAAGCGACGCAATTGCACGTCC
TAGTAGGCTATCCGCCCAAGCCATTGGATCTCTCGCAGCAGCAGGAGCAG
CGCGCCCTCAAGGCGGTCGGAATCAACAGCGGAGAGACGTTGATTGTGGA
GGAGAAGGCTGCCCCTGCTCCTGCTGCCCCTGTGCCTGGCGGCACCACCG
TGGAGGATGACGAGGCGCTGGCGCGTCGTCTGCAGGCCGAGGAGGAGGCA
CAGCTGCTGCAGGAAACCGCTGGCGGTCCAGTCGCCCAGGCAGCAGACTA
CCAGCTGCCAGTGGCGCCGACGGAAAGCGGACCGAATGGCGACTTTAATG
GCATACTGCTGAAGAAGGTGGTGCCGGCGGACAATTCGTGCCTCTTCACC
AGCATACGATTCGTGCTCAACGGGAAGGTGGACAACGAGGGCAGCGAAAT
GATGCGTCACATCATTGCGCAGGAGGTGGCCGCCGATCCGCAGAGCTACA
ACGACGCCGTGCTGGGCAAATCGAATGCCGAGTACTGCGCCTGGATACAG
AAGGCGGATTCGTGGGGCGGCGCCATCGAAGTGTCCATACTGTCCAACTA
CTATGGCATTGAGATCGATGTGGTGGACATACAAAACGCCATTATCAATC
GCTTTGGCGAGGACAAGAACTTTGGACTGCGTGTCTTCCTGCTCTTCGAT
GGCATCCACTACGATCCGCTGTACATGGAGACATCGCCGAGTGCTGCGCC
GGCCACCATCTTCCCGGTGGGAGAGCTGGGCGTCTATCAGCATGCCGAGC
AGTTGGCCAACGAGGCGCAGTCCTCCCGCCAATACACCAATGTGGATAAA
TTCACGCTGCGCTGCATGCAATGCGATGTCAGGCTGGTCGGCCAGGTGCA
GG
FMO13269.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4603-RC | 1394 | CG4603-RC | 115..1108 | 9..1002 | 4910 | 99.6 | Plus |
| CG4603-RB | 1451 | CG4603-RB | 172..1165 | 9..1002 | 4910 | 99.6 | Plus |
| CG4603-RA | 1451 | CG4603-RA | 172..1165 | 9..1002 | 4910 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5134391..5135384 | 9..1002 | 4910 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:26:00 has no hits.
FMO13269.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:51 Download gff for
FMO13269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 171..1164 | 9..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:22 Download gff for
FMO13269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 172..1165 | 9..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:58 Download gff for
FMO13269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 172..1165 | 9..1002 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:58 Download gff for
FMO13269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5134391..5135384 | 9..1002 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:22 Download gff for
FMO13269.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5127491..5128484 | 9..1002 | 99 | | Plus |
