FMO13273.5prime Sequence
1095 bp (1016 high quality bases) assembled on 2013-02-11
> FMO13273.5prime
CAGTCGACATGTGTTTCAGGCCACGCCTCGGTCTAAGAAGAATTACAAAA
CAAGTTCAAAAATGGCTTAATCGACAACAATATCCAATGAGTACGGCCTC
AGTTGTGGTCCAATATCACGAAGAACCAGACAAATCAGATGGTGACAGCA
AACTTTACCGTGCCTTGACCTTATCAAATGGATTACGTGCTATGCTAATA
TCGGATTCTTATATTGACGAGCCGTCAATTCATCGTGCGTCCAGAGAAAG
TTTGAATTCCTCCACCGAGAATTTTAATGGGAAATTGGCGGCATGTGCAG
TACTTGTTGGCGTTGGATCATTTAGTGAACCGCAACAATATCAGGGATTA
GCACACTTTGTGGAACACATGATATTTATGGGGTCTGAGAAATTCCCCGT
AGAGAACGAATTCGATTCGTTTGTGACCAAAAGCGGCGGTTTCAGTAATG
CGCATACTGAAAACGAGGAGACTTGCTTCTACTTTGAGTTGGATCAAACT
CACCTGGATAGGGGTATGGATCTATTCATGAACCTAATGAAGGCTCCACT
AATGCTTCCCGATGCCATGAGTCGCGAACGCTCTGCCGTCCAGTCGGAGT
TCGAACAGACCCATATGAGAGATGAGGTGCGGAGAGATCAGATCCTGGCG
AGCTTAGCCAGTGAGGGATATCCACATGGCACTTTCAGTTGGGGAAATTA
TAAGACCCTTAAAGAGGGCGTCGATGATAGCAGCCTGCACAAAGAGCTTC
ACAAGTTTTACCGAGATCACTACGGCTCCAACCGAATGGTTGTTGCACTC
CAAGCCCAGCTTTCGTTGGATGAGTTGGAGGAATTGCTGGTCCGTCATTG
TGCAGATATTCCTACTAGCCAGCAAATTCCATTGACGTATCCCAGTTAAG
TTACCAAAAGCCTTTCGAGACCAGTCTACAGATGTATTCCTAGTTCAGCC
CGTTGAGATGTGTGCAAGCTGGAGCTACTGGATGCTACCCCCATGAAAAC
TTACGGCAGCAAGCCGATATGTTTATTCCCACTATGGTATGAGGGAGTGG
AAGGCTATGGGCTACCTACGTCATCCACTGGGGACTAACGGTTGA
FMO13273.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10588-RB | 3727 | CG10588-RB | 47..1134 | 8..1075 | 4870 | 97.6 | Plus |
| CG10588-RA | 3237 | CG10588-RA | 47..1134 | 8..1075 | 4870 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20956980..20957954 | 8..976 | 4580 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:26:14 has no hits.
FMO13273.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:53 Download gff for
FMO13273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10588-RA | 42..1142 | 1..1083 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:29 Download gff for
FMO13273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10588-RA | 42..1142 | 1..1083 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:05 Download gff for
FMO13273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10588-RA | 42..1142 | 1..1083 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:05 Download gff for
FMO13273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20956975..20958075 | 1..1083 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:29 Download gff for
FMO13273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20950075..20951175 | 1..1083 | 96 | | Plus |
