FMO13277.5prime Sequence
1130 bp (1030 high quality bases) assembled on 2013-02-11
> FMO13277.5prime
CAGTCGACATGTTGGCCGCCCGCAGATTACTACGATCACCGCGGATTACC
GGTGCCCTAAGCTGGTCCCGCTGGAGCAGCGATGCCGCGAAGGCCACAAC
AGAAACCTCCGCCCTTTTGCAGAACGCGGAGAAGCGGCAGCAACTGCTCA
ACGAGCTTTCTGAGCCGCTGGAACAGAAAGGCCGGCCCGCCATCGATCCC
AAGGAAACAAGTGTGATGCTCTTTCCCGGTCAGGGCACCCAGTACGTGGG
CATGGCCAAAGACCTGCTCCGGTTCCCGGGCGCCCGTCGCATCTTCGAGC
TGGCCAACGAGGTGCTGAAATACGATCTGCTCAAGATCTGCCTGGAGGGA
CCACGTGAGAAACTGAATCGCACGGAGCACGCTCAGCTGGCTGTGATGGT
ATCCTCGCTGGCAGCACTGGAGCAGTTGCGTGAGGAGCGACCCAAGGCCA
TTGAAACGTGTGTAGCTGCCGCAGGCTTTAGTTTGGGCGAGATTACCGCA
TTGGTGTACGCGGATGCCCTGCCTTTCGACAAGGCATTGCGATTGGTGCA
GGTGCGGGCCACCGCCATGCAGGCGGCATGTGACCAGGCAGCCGGAGCCA
TGGCGATGACTCTCTACGGACCGGATACCAATCTGGGAGAGGCCTGCGCT
CGCGCGCAGCAATGGTGTCTGGACAAAGGAGTGGAGTCGCCCTACTGTGG
CATCGCCAACTACATGTATCCGCACTGCAAGGTAGTGGCCGGCAACGTAG
AGGCCCTGGAGTTCCTGGAACAAAATGCCAAGTCCTTCAAAATCCGGCGG
ATGAAGAGATTGGCTGTCAGTGGCGCCTTTCACACTCCTCTAATGCAAAG
CGCCGTGAGCCATTTACCAAAGCCCTGAAAACGGTGCGACTTCAGACCCC
GTCATTAGAGTGTACTCCAATGTGGATGGCAAACCCTATCGCCATGCCAA
GCACATCCTACGCAGCTGCCCAAGCAAATCGTGAAGCCCGTCAAGTGGGA
GCAGACTCTCACGAGATGTACGAGCGCAAGCAAAGCCGTCGACTTTCCAC
GCACCTTTCGAATGCCGTACTTGCAAGCCTGGTCAAGTCCTGTGAAGTAA
ATGCCAAGCCGCTCAATCAGCTTTATGTAT
FMO13277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beg-RA | 1198 | CG7842-RA | 32..1157 | 9..1125 | 5185 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17035699..17036769 | 9..1077 | 4960 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:26:31 has no hits.
FMO13277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:58 Download gff for
FMO13277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beg-RA | 26..1156 | 9..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:40 Download gff for
FMO13277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beg-RA | 32..1162 | 9..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:12 Download gff for
FMO13277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beg-RA | 32..1162 | 9..1130 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:12 Download gff for
FMO13277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17035699..17036829 | 9..1130 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:40 Download gff for
FMO13277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17028799..17029929 | 9..1130 | 97 | | Plus |
