FMO13282.5prime Sequence
461 bp (461 high quality bases) assembled on 2013-02-11
> FMO13282.5prime
CAGTCGACATGTCAGAAGAAGAAGCCCCAGGATCTCCGGGTGAGGCTGTT
GAAGAAGAAGATACCACTACATCCGATGCTGATACAACCACAGCTGGTGC
CCGCATGATGATGATCCACCCATGGCTGACGGCCGCCGCAGTGGCCATGT
ATGCCACCAAGGTCATGTGGGTCAAGTTCCGTGAGATCGGCCTGGCTAAA
CAGGAAAAACGGCTCAAAAATCAACTGGCGAAGCAGTCTAAGCCCTTGCA
GACTATTGATGAAGATGTTTCCGAATCTGATGCAGAATATGATGCAGAAT
CTGATGCAGAATCTGATGCAGAATCAGATGCAGAGGACGAAGACGTCGTC
GGGCCCCAAGTCGAAGATGCAGCAGAGGGACCGGGATTCGAGCCAAACCG
TGTGGATATATGCCATCGCCCGATCGAAGTCTCTACTGACTGCGCAAGCT
TTCTAGACCAT
FMO13282.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12699-RB | 766 | CG12699-RB | 74..508 | 9..443 | 2175 | 100 | Plus |
| CG18469-RA | 509 | CG18469-RA | 108..212 | 99..203 | 225 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17246788..17247222 | 443..9 | 2175 | 100 | Minus |
| 2R | 25286936 | 2R | 17246066..17246170 | 203..99 | 225 | 81 | Minus |
Blast to na_te.dros performed 2014-11-28 18:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib2 | 2844 | transib2 TRANSIB2 2844bp | 2535..2571 | 304..268 | 104 | 75.7 | Minus |
FMO13282.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:54:52 Download gff for
FMO13282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 65..515 | 1..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:26 Download gff for
FMO13282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 65..515 | 1..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:01 Download gff for
FMO13282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 65..515 | 1..451 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:01 Download gff for
FMO13282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17246781..17247231 | 1..451 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:26 Download gff for
FMO13282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13134286..13134736 | 1..451 | 98 | | Minus |
