FMO13288.5prime Sequence
242 bp (242 high quality bases) assembled on 2013-02-11
> FMO13288.5prime
CAGTCGACATGAGCGCCCTGTTCAACTTCCACAGCCTGCTGTCGGTCATC
CTGCTGCTGATCTGCACCTGTGCCTACCTGCGCTCGCTCTTCCCCAGCTT
GATAGACCGCAACAAGACCGGATTCATGGGCACCTTCTGGAAGCTGGCAA
GGATTGGGGAGCGCAAGTCGCCGTGGGTAGGAGCCGCCTGCCTGATCATG
GCCTTCACCGTTCTCTTTTGGAGCGCAAGCTTTCTAGACCAT
FMO13288.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ksh-RB | 435 | CG14199-RB | 90..306 | 8..224 | 1085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19494727..19494837 | 121..11 | 555 | 100 | Minus |
| X | 23542271 | X | 19494549..19494652 | 224..121 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:27:18 has no hits.
FMO13288.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:06 Download gff for
FMO13288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ksh-RB | 76..301 | 8..235 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:07 Download gff for
FMO13288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ksh-RB | 90..315 | 8..235 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:35 Download gff for
FMO13288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ksh-RB | 90..315 | 8..235 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:35 Download gff for
FMO13288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19494540..19494651 | 122..235 | 95 | <- | Minus |
| X | 19494727..19494844 | 1..121 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:07 Download gff for
FMO13288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19388573..19388684 | 122..235 | 95 | <- | Minus |
| arm_X | 19388760..19388877 | 1..121 | 96 | | Minus |
