Clone FMO13293 Report

Search the DGRC for FMO13293

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:132
Well:93
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34261-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13293.5prime Sequence

245 bp (245 high quality bases) assembled on 2013-02-11

> FMO13293.5prime
CAGTCGACATGGTAAATTTGCCTATTTTCCAGAAACAAATTTGGACAGTT
GTTGAATTTGCAGAGACAAAATGTTCAGCCAGGCGGCGTGGCTGTCCTTC
AGGACCAGCAGCGATTTATTTACTATCTGATCACCAAGAAATCCAGCTGG
GGAAAGCCCACCTACGAACTTCTCCAGAGTTCCTTGATCGCCATGCGAAA
ACACATGGTATGTTTATGTATCTTCTAGCAAGCTTTCTAGACCAT

FMO13293.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG34261-RB 796 CG34261-RB 187..362 32..207 880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21197047..21197265 9..227 1095 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:28:02 has no hits.

FMO13293.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:12 Download gff for FMO13293.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34261-RA 201..423 9..232 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:33 Download gff for FMO13293.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34261-RB 183..362 26..207 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:57 Download gff for FMO13293.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34261-RB 183..362 26..207 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:57 Download gff for FMO13293.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21197047..21197269 9..232 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:33 Download gff for FMO13293.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21190147..21190369 9..232 99   Plus