FMO13294.5prime Sequence
1061 bp (1050 high quality bases) assembled on 2013-02-11
> FMO13294.5prime
CAGTCGACATGTCGGTAACATCTTCGATTGAGAAGCCAACAACCACAGCA
AGTGCAATTCAGCAACAGTATCAGCATCAGCAGCAGCAACAGCAACAGAA
GCCACAACAGCAGCAACAGCAGGATAAAAGCAGCACCATCGCAATCGCAG
CAGCAGCAGGACAGCAACAAAAGCGCAAATCCCTGAGTTCCAAGCGCTCG
TATTCGCTATCCTCGTCGAGCGCCTCCAGTTCTGGTTCCTTTGGGGCGAT
AAGGTCTGCGACATCGCCACTGGTCACCACCGCCGAGAGGGAGAAAGATA
AGGAGAAGAGCTCCTCCTCGGCCAGCAATAGCCACCATCAACATCATCAG
CTTCATCAACACCAACATCATCATCAGCAGCAGCAGTCGCAGCAGCAGCA
GCAATCCTTTTTGCCGTACTCATATTGCACCGATACCATAGCAGCAGTAC
ATCATCAACGACAGTCGTACGCGCTGGTCCAGAAGCCCCCATCGTTGCGC
TACCAGGGAAAGCCCCATCATCAGCTGAGCAACTTCTCGCCCACGATGAC
CTCCTCGGAACCCTCATCCCCATTGGCCGCCGATGGTTGCGGATCCGGAA
TCCTTAGCCCATCGGAGGTCGCCACCCATTGTTGCGCCAATGTCAAGGCC
AATATCACCACCCCATTGGCCACCACCACACAGAAAATGCACCGAACAAT
ACCATCTGATAAAATTAACCTACGCCTCATTCTTGTTAGTGGTAAAACAA
AAGAGTTTATTTTTAGCCCTTCAGATTCCGCAGGTGATATTGCACAAACA
GTATTTGATAATTGGCCAGAAGATTGGACCCACGAAACTGTGTCGAAAGC
CGAAATCTTGCGCTTAATTTATCAAGGTCGTTTTCTTCATTGCAATGTAA
CCTTAGGAGCACTGGGACTTCCATTAGCAAACGACTGTTATGCATTTAGT
GCCACGTGATATTTGCCAGAGCCCAATTCACAGATCAAAGACAAAATAGT
AAGCGTTCTGGACGATGCTGTTCGACAGTGCTCTATTTTGGCAAGCTTTT
CTTAGAACCAT
FMO13294.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
UBL3-RC | 2160 | CG9038-RC | 479..1524 | 4..1040 | 4995 | 98.9 | Plus |
UBL3-RB | 1677 | CG9038-RB | 580..1625 | 4..1040 | 4995 | 98.9 | Plus |
UBL3-RA | 2250 | CG9038-RA | 569..1614 | 4..1040 | 4995 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15851585..15852294 | 713..4 | 3535 | 99.9 | Minus |
X | 23542271 | X | 15850548..15850712 | 982..821 | 695 | 97.6 | Minus |
X | 23542271 | X | 15851088..15851196 | 822..714 | 545 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 18:26:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2487..2873 | 37..404 | 159 | 54.8 | Plus |
FMO13294.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:01 Download gff for
FMO13294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UBL3-RA | 547..1600 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:52 Download gff for
FMO13294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UBL3-RA | 566..1619 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:22 Download gff for
FMO13294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
UBL3-RA | 566..1619 | 1..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:22 Download gff for
FMO13294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15850546..15850710 | 823..983 | 97 | <- | Minus |
X | 15851088..15851196 | 714..822 | 100 | <- | Minus |
X | 15851585..15852295 | 1..713 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:52 Download gff for
FMO13294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15744579..15744743 | 823..983 | 97 | <- | Minus |
arm_X | 15745121..15745229 | 714..822 | 100 | <- | Minus |
arm_X | 15745618..15746328 | 1..713 | 99 | | Minus |