FMO13309.5prime Sequence
239 bp (239 high quality bases) assembled on 2013-02-11
> FMO13309.5prime
CAGTCGACATGTGCGACTACCAGATGGAGTACTCCTTTATTTTTGAAGAC
AGCTCCTGCGAGGGCGATGCCTCGATGGCATCCTACGACAATGGATTCGA
GTCCATGTGGCATCAAGTGCGCGAGGAGTTGCAAAGGGAGCGGGAGATGA
ATGAGCTCTGCCAGGTTTTCCAGCAAAACTTGAGCCTGAGTCCGCCGGTC
ATCGCGGATAGATGGAGATTCGCAAGCTTTCTAGACCAT
FMO13309.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pgc-RD | 643 | CG32885-RD | 27..239 | 9..221 | 1065 | 100 | Plus |
| pgc-RA | 1211 | CG32885-RA | 595..807 | 9..221 | 1065 | 100 | Plus |
| pgc-RC | 686 | CG32885-RC | 70..282 | 9..221 | 1065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22332197..22332409 | 9..221 | 1065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:29:41 has no hits.
FMO13309.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:28 Download gff for
FMO13309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgc-RC | 117..334 | 9..228 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:30 Download gff for
FMO13309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgc-RC | 70..287 | 9..228 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:50 Download gff for
FMO13309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgc-RC | 70..287 | 9..228 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:50 Download gff for
FMO13309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22332197..22332414 | 9..228 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:30 Download gff for
FMO13309.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18219702..18219919 | 9..228 | 98 | | Plus |
