FMO13315.5prime Sequence
1127 bp (1021 high quality bases) assembled on 2013-02-11
> FMO13315.5prime
CAGTCGACATGTACTCTGACAATGATGACACCCACAAAAACTCGAATGGA
TCGCATCGCATACGGAACGTGCTGACTTTGGAGGAGCGTGTGGCTGCCAT
CCGACAGTACGACATTGTGCCCATGTACAGTAAGATTGCGAGGAACTTTA
ATTGCAGCTGGGAGCAAATCAAGAGCATAGTCTCCAATCGGGAAGCCATC
CTGGAGTTCCACAAGGCCACCAATCGGCTCAGCCAGCCGGCCAATAAGGA
TGCCGAGCTGCGCCGGCGCAAGCTGAACTTTCTGGGCCACTGCCTGTACG
AGTACATCCAGAGGGCCCAGTTTTACCTCCACAGCGATGTGAACGAGGAG
ATGATCCGCAACCGTGCGATCGAGTTCCGGGATCTCATGCAACTCGATGG
TTTTGTGCCGAACAAACCGTGGATCAATCACTTCAAGGCCGCCTATAATA
TAACACTGTCGAATCGTCAGATCACGATAGTCCGCCGACCACCACGATCT
ATGGACTTGAGGGACATTATGTCGTACTGTGGACGACACACCTCGATGTC
TTGTAGCTTAGCGCCTAGATCGCCGGAACCTGCGCTCACTAGCAGTGATC
GACCTCTTTATCGTACAAAGACATTGGTCACCACCTCTAGCCAAAATCAA
GCCACCTCGGATGAAGTGCACCTGCGTAGAAAGCGAAAGTTAGCGTTCCT
GGAGAAATGCGTTTATGAGTACATCCAGCGATCACAGTTGGTTCGCCAGG
GTCGTCTTGACCTAGACAATTTGCGCTTTGTGGCCATTAGTTTAAGGGAC
ATCCTCAAAATCGACTCCTTCTTTCCCGACAAAGTGTGGTTGAGCACTTT
AAGAGTCGCTATAACTTTAATTTCACGGTGGGAGTTCAGTGACGAACCGC
CGCTTGCCGCTTTCCCTGGACCTAAGAGATATAGTTAGTTATTGCGGCCG
GATGACATAAGATCACGCTGGACCACAGAAGTCGCAGAGACTGAGCAGAG
CGACAGCTGAGGTGACCATGCCCAGGTGGACTAACCCGAGATGAGCACGA
GAGACGATGATGCTGCATGGATGCCCCTGAGCTCTAGATTAGGATGATAG
GATTGACATGACTATGTAATAGGATTG
FMO13315.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13895-RA | 1924 | CG13895-RA | 231..1243 | 2..1005 | 4820 | 98.9 | Plus |
| CG13895-RB | 1945 | CG13895-RB | 271..1264 | 21..1005 | 4755 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 706651..707622 | 987..21 | 4615 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:30:20 has no hits.
FMO13315.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:35 Download gff for
FMO13315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13895-RA | 226..1239 | 1..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:54 Download gff for
FMO13315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13895-RA | 230..1243 | 1..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:12 Download gff for
FMO13315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13895-RA | 230..1243 | 1..1005 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:12 Download gff for
FMO13315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 706609..707622 | 21..1021 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:54 Download gff for
FMO13315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 706609..707622 | 21..1021 | 98 | <- | Minus |
