FMO13319.5prime Sequence
1144 bp (1038 high quality bases) assembled on 2013-02-11
> FMO13319.5prime
CAGTCGACATGACACAAAACCGGAGCACATGGATTGGATGCAGCTTGGGC
GGCCTGTTGGTCGCTCTATTGGCCCTGCAAACGATGCCACAGGGCACTGA
AGGAGCCAACATCCTGGGCGTCTTCACCAGCCACAGTCCGTCGCATTTCA
TTGTGCACATGTCCATCATGAAGACGCTGGCGGAGAAGGGTCACAATGTG
ACCGTCGTCTCCTCCGTTCCACCTAAAGTCACCCACAAGAGCATTAACCA
CATTGTGGTGCCAATGAGTGCCGAAGATGAGAAAGTGCTCAACGATGGTA
TGGCTGGAATGGTGAAGGAGAAGCCTTCGATTTGGAATACGATGAAATCG
ATCTTCAGCTCGTTAGCCCTGCTCATTGATAAGCAGGTGGACGTTTTGGA
GGATCCGCGCTTCCAGGAACTCTATCTGAACAAGGGCAACAAATTCGACG
TGGTCTTCGTGGGATTCTTCTTCAACACGTACCAGGTGGCGTTGGGTGCC
CGGTTTAATTGCCCCGTTATAATATCCTGGTCGGGCCCACCCATGATGAT
GGTCAACGAGGTGCTGGGTAATCCCGAGCTATCCAGTGTTCCCCAAATGC
ACATTTCCGCGCCTCCCGGTCAGCCTATGAATTTCCAGCAGCGAATGCAG
AACTTTGCCAGCACTTTGGGATTCAATGCTCTCAACATCTTCCTGAATCA
CAAATACAACAAGTTCTATGACCGTCTTTGGAGCAAAGACAAGTCAATGC
CCACTTTTGCGCACGCCAAGAGGAATGTCTCTTTGGCGTTTTGCAATGGC
CATGGCATCAGCGAAGTCCCATTCGTCCGAATGTGCCTGGAGTATCGAAA
TTGGAGGCATCCAGGTGAGAGCAAGCCCGATCCCTGCCAGAGGACATACA
GGAGTTTCTGGAGAAGGCAAGCACGGAGCCATTCTCTTCAGTTTGGGTTC
ACTTAAGGCGAACATATCCAGCCCGAGTGTAAGACCAATTCAGATTGAGC
AGCTTAGCAGCAGTGATTCTGGAAGTGGGAGGATCCAGAACCCGCCCGGC
AGTCCGCTTAAATTACTCTAACAGATTGGCTTGCCAGGACGAATTCTGGG
CATCCAAGGTCAGCTGTTCATTACGCATGCGTCAGGAGATGTGC
FMO13319.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:30:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt36Bc-RC | 1738 | CG17932-RC | 40..1189 | 8..1131 | 4865 | 96.3 | Plus |
| Ugt36Bc-RB | 1954 | CG17932-RB | 256..1405 | 8..1131 | 4865 | 96.3 | Plus |
| Ugt36Bc-RA | 1934 | CG17932-RA | 236..1385 | 8..1131 | 4865 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16799807..16800520 | 8..721 | 3570 | 100 | Plus |
| 2L | 23513712 | 2L | 16800600..16800863 | 722..976 | 925 | 96.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:30:47 has no hits.
FMO13319.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-02-11 10:55:39 Download gff for
FMO13319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 224..1278 | 1..1036 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:12 Download gff for
FMO13319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 228..1282 | 1..1036 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:24 Download gff for
FMO13319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 228..1282 | 1..1036 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:24 Download gff for
FMO13319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16799799..16800520 | 1..721 | 99 | -> | Plus |
| 2L | 16800600..16800932 | 722..1036 | 93 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:12 Download gff for
FMO13319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16799799..16800520 | 1..721 | 99 | -> | Plus |
| arm_2L | 16800600..16800932 | 722..1036 | 93 | == | Plus |
